GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2185 contig Csv1_Contig2185:677..1410. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  +  KA+  AGL    ID+ E+NEAF   A   + + KLL    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAQLKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  +  KA+  AGL    ID+ E+NEAF   A   + + KLL    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAQLKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 61/149 (40.94%), Postives = 89/149 (59.73%), Query Frame = 3
Query:   42 IVDKDEGLE-KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            + D DE +  +     L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A +R  A A   P      P  +  KA+  AGL    ID+ E+NEAF   A   + + KLL    E+VN HGG ++LGHP GCSGAR
Sbjct:  207 VFDYDETIRPETTLESLATLKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVVRAMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  A  KA+  AGL    ID+ E+NEAF   A   + + K+L    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLTIADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22
Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 3
Query:   33 HPIIVDKDEGLEKFDAAK-LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAI---ANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            H ++ + DE +    + + + KLRP F    G+VTAG +S +SDGA+A++++S  +A  LGL+  AKIR  A A          P  A  KA+A AGL    IDY E+NEAF   ++    + KLL    E+VN +GG ++LGHPLGCSGAR
Sbjct:  204 HKVLCEIDEVIRPGASIEDMQKLRPVFDPANGTVTAGTSSALSDGASAMLVMSAERAQALGLKPRAKIRSMAVAGCDAAIMGYGPVPATQKALARAGLTIDDIDYVELNEAFAAQSLPVAKDLKLLDKMEEKVNLNGGAIALGHPLGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 3
Query:   42 IVDKDEGLE-KFDAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDP--EQVNAHGGXVSLGHPLGCSGAR 473
            +V+ DE +  +  A  L  LRP F    G+VTAG +S +SDGA+A++++S  KA ELGL    KIRG A A   P      P  A  KA+  AGL    I+ +E NEAF   A++  + L  +   +Q+N +GG ++LGHPLGCSG+R
Sbjct:  203 LVEHDEVIRPETTAESLSALRPVFDPVNGTVTAGTSSALSDGASAMLVMSAAKAKELGLTPRVKIRGMAVAGCDPATMGFGPVPATKKALKRAGLSIADIELFEFNEAFAAQALSCVRSLKVEDKMDQINLNGGAIALGHPLGCSGSR 350          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.487e-21
Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 3
Query:   42 IVDKDEGLE-KFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            I   DEG      A  L  +RP+F K+ G+ TAGNAS +SDG A ++L     A +L L V+ +   F      PE     P+ AI K +   GL+   ID +EINEAF   A+     LG D  +VN  GG ++LGHPLGC+GAR
Sbjct:  238 ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGAR 383          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEU5 (3-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (strain A1501) GN=fadA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 58/133 (43.61%), Postives = 83/133 (62.41%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LGLQ +A +R  A A   P      P  +  KA+  AGL    I + E+NEAF   A   + + KLL    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAELKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLQPMAVVRAMALAGVDPAIMGYGPVPSTQKALKRAGLTMDDISHVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   39 IIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            + V+KD+G+     A KL KL+P+F   G+  AGNAS ISDGA A++L+    A +LG  ++AK          PE     P+ AI   + + GL    +D +EINEAF   A+ + +  G D  +VN  GG +++GHPLG +GAR
Sbjct:  233 VTVNKDDGIRPGVTAEKLGKLKPAFSAEGTTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVLEDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVNPRGGAIAIGHPLGATGAR 378          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21
Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +LRP F    G+VTAG +S +SDGA+A++++S  KA ELGL++ A+I+G A A   P      P  A  KA+  AGL    +D  E+NEAF   ++   K   LL    E+VN +GG ++LGHPLGCSGAR
Sbjct:  223 LSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGLKIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLAIEDMDVVELNEAFAAQSLPCAKDLGLLEVMDEKVNLNGGAIALGHPLGCSGAR 355          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
FADA_PSEAB3.913e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa ... [more]
FADA_PSEA73.913e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa ... [more]
FADA_PSEMY5.111e-2240.943-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (... [more]
FADA_PSE145.111e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_ALCBS6.675e-2242.763-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis... [more]
FADA_COLP31.139e-2142.573-ketoacyl-CoA thiolase OS=Colwellia psychrerythra... [more]
THIK_YEAST1.487e-2141.783-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomy... [more]
FADA_PSEU51.942e-2143.613-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (s... [more]
THIK_YARLI2.536e-2139.733-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
FADA_VIBPA2.536e-2145.863-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.