GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2185 contig Csv1_Contig2185:677..1410. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21
Identity = 66/150 (44.00%), Postives = 88/150 (58.67%), Query Frame = 3
Query:   39 IIVDKDEGLE-KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            I+V+ DE +  +     L KL P F  + G+VTAG +S +SDGA+A++++S  KA ELGL  IAK+R  A A   P      P  A  KA+  AGL    ID  E+NEAF   +I   K   LL    ++VN +GG ++LGHPLGCSG R
Sbjct:  206 ILVEVDEVIRPETSMESLAKLAPVFMPKVGTVTAGTSSALSDGASAMLMMSAKKAEELGLTPIAKVRSMAVAGCDPAIMGYGPVPATKKALKRAGLTIADIDIVELNEAFAAQSIPVLKDLGLLDLVDDKVNLNGGAIALGHPLGCSGTR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21
Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = 3
Query:   39 IIVDKDEGLEKFDAAK-LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG---XDPEQVNAHGGXVSLGHPLGCSGAR 473
            I+V+ DE +      + L KLRP F    G+VTAG +S +SDGA+A++++S  KA ELGL + A+I+  A A   P      P  A  KA+A AG+    +   E+NEAF   ++   K LG      E+VN +GG ++LGHPLGCSG+R
Sbjct:  202 ILVEDDEVIRPETTVEGLSKLRPVFNPASGTVTAGTSSALSDGASAMLVMSEAKAKELGLPIRARIKAMAVAGCDPSIMGYGPVPASKKALAQAGITIDDLGVVELNEAFAAQSLPVMKDLGLMDVVDEKVNLNGGAIALGHPLGCSGSR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21
Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG---XDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG++S +SDGA+A++++S  KA ELGL + AKIR  A +   P      P  A  KA+  AGL    ID +E+NEAF   ++   K LG      E++N +GG ++LGHPLGCSG+R
Sbjct:  219 LAALRPAFDPANGTVTAGSSSALSDGASAMLIMSEEKANELGLTIRAKIRSMAVSGCDPAIMGYGPVPATKKALKRAGLSIDDIDLFELNEAFAAQSLPCIKDLGLFDVMEEKINLNGGAIALGHPLGCSGSR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +LRP F    G+VTAG +S +SDGA+A++++S  KA ELG+ + A+I+G A A   P      P  A  KA+  AGL    +D  E+NEAF   ++   K   LL    E+VN +GG ++LGHPLGCSGAR
Sbjct:  219 LSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQSLPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +LRP F    G+VTAG +S +SDGA+A++++S  KA ELG+ + A+I+G A A   P      P  A  KA+  AGL    +D  E+NEAF   ++   K   LL    E+VN +GG ++LGHPLGCSGAR
Sbjct:  219 LSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQSLPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 62/146 (42.47%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   39 IIVDKDEG-LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            IIVD DEG  E   A  L KLRP+F   G+ TAGNAS +SDGAAA++L+    A   G  +I K    + A   PE     P+ AI + +   GL    ID +EINEAF    + + + +    E++N +GG ++LGHPLG +GAR
Sbjct:  231 IIVDTDEGPREGVTAESLGKLRPAFD--GTTTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVLKRTGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGAR 374          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG++S +SDGA+A++++S  KA ELGL + AK+R  A +   P      P  A  KA+  AGL    I+ +E+NEAF    +  I +  LL    E+VN +GG ++LGHPLGCSG+R
Sbjct:  219 LAALRPAFDPANGTVTAGSSSALSDGASAMLVMSEEKANELGLPIRAKVRSMAVSGCDPSIMGYGPVPATKKALKRAGLSLDDIELFELNEAFAAQSLPCIKDLGLLDVMDEKVNLNGGAIALGHPLGCSGSR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG++S +SDGA+A++++S  KA ELGL + AK+R  A +   P      P  A  KA+  AGL    I+ +E+NEAF    +  I +  LL    E+VN +GG ++LGHPLGCSG+R
Sbjct:  219 LAALRPAFDPANGTVTAGSSSALSDGASAMLVMSEEKANELGLPIRAKVRSMAVSGCDPSIMGYGPVPATKKALKRAGLSLDDIELFELNEAFAAQSLPCIKDLGLLDVMDEKVNLNGGAIALGHPLGCSGSR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20
Identity = 62/146 (42.47%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   39 IIVDKDEG-LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            IIVD DEG  E   A  L KLRP+F   G+ TAGNAS +SDGAAA++L+    A   G  +I K    + A   PE     P+ AI + +   GL    ID +EINEAF    + + + +    E++N +GG ++LGHPLG +GAR
Sbjct:  231 IIVDTDEGPREGVTAESLGKLRPAFD--GTTTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAYAIPEVLKRTGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGAR 374          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 3
Query:   45 VDKDEGLEKFDAAK-LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            V +DE +     A+ L +LRP F    G+VTAG +S +SDGAAA++++S  KA ELGL    KIR  A A   P      P  A  KA+  AG+    ID  E+NEAF    +  +   KL     E+VN +GG ++LGHPLGCSGAR
Sbjct:  204 VTEDEVIRPETTAEGLSQLRPVFDPANGTVTAGTSSALSDGAAAMLVMSADKAKELGLTPRVKIRSMAVAGCDPSIMGYGPVPATEKALKRAGVSIDDIDVVELNEAFAAQSLPVLKGLKLFDKMEEKVNLNGGAIALGHPLGCSGAR 351          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
FADA_MARMS2.536e-2144.003-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain... [more]
FADA_PSEHT4.326e-2142.003-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
FADA_ALISL4.326e-2145.113-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida ... [more]
FADA_VIBVY5.650e-2145.113-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADA_VIBVU5.650e-2145.113-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]
THIKB_CANTR9.638e-2142.473-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]
FADA_VIBFM9.638e-2144.363-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADA_VIBF19.638e-2144.363-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
THIKA_CANTR1.259e-2042.473-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]
FADA_IDILO1.259e-2043.923-ketoacyl-CoA thiolase OS=Idiomarina loihiensis G... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.