GO241368

Overview
NameGO241368
Unique NameGO241368
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 6.862e-14
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 2
Query:    2 AGIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            AG+DLPYSCRAG+CSTCA              F ED   + GYV  CVAYP SD+ + T K+EE+F
Sbjct:   33 AGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.963e-14
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G DLPYSCRAGSCS+CA              F +DDQ+  G+V  CVAYP SDVT+ET K+EE+
Sbjct:   32 GHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_MARPO (Ferredoxin OS=Marchantia polymorpha PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.963e-14
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 2
Query:    2 AGIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            AG+ LPYSCRAG+CS+CA              F +DDQ+D GYV  C+AYPTSD+T++T ++E +
Sbjct:   30 AGLSLPYSCRAGACSSCAGKVTAGEVDQSDESFLDDDQMDEGYVLTCIAYPTSDLTIDTHQEEAL 94          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_HORVU (Ferredoxin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.963e-14
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            GIDLPYSCRAGSCS+CA              F +DDQ++ G+V  C AYP SDV +ET K+EE+
Sbjct:   32 GIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.963e-14
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G+DLPYSCRAG+CS+CA              F ED Q++ G+V  C+AYPT DVT+ET K+EE+
Sbjct:   32 GMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.171e-13
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            GIDLPYSCRAGSCS+CA              F +D+QI  G+V  CVAYP SD T+ET K+EE+
Sbjct:   32 GIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER1_DUNSA (Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.171e-13
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 2
Query:    2 AGIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            AG+DLPYSCRAGSCS+CA              F +DDQ+D+G+V  CVAY TSD T+ T ++E ++
Sbjct:   30 AGVDLPYSCRAGSCSSCAGKVESGTVDQSDQSFLDDDQMDSGFVLTCVAYATSDCTIVTHQEENLY 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.529e-13
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G DLPYSCRAGSCS+CA              F +DDQ+  G+V  CVAYP SDVT+ET K+EE+
Sbjct:   32 GHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER1_CYAPA (Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 1.997e-13
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            GIDLPYSCRAG+CSTCA              F +D Q+ AGYV  CVAYP+SD TV+T ++E ++
Sbjct:   35 GIDLPYSCRAGACSTCAGKVVEGTVDQSDQSFLDDAQLAAGYVLTCVAYPSSDCTVKTHQEESLY 99          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_PANGI (Ferredoxin OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            GIDLPYSCRAGSCS+CA              F  DD +DAGYV  C AY  SDV +ET K+EE+
Sbjct:   33 GIDLPYSCRAGSCSSCAGKVVSGKVDNSDNSFLNDDNMDAGYVLTCHAYANSDVVIETHKEEEV 96          
The following BLAST results are available for this feature:
BLAST of GO241368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
FER1_RAPSA6.862e-1451.52Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=... [more]
FER_PHYAF8.963e-1454.69Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]
FER_MARPO8.963e-1449.23Ferredoxin OS=Marchantia polymorpha PE=1 SV=1[more]
FER_HORVU8.963e-1453.13Ferredoxin OS=Hordeum vulgare PE=1 SV=1[more]
FER2_SPIOL8.963e-1451.56Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1[more]
FER_COLES1.171e-1354.69Ferredoxin OS=Colocasia esculenta PE=1 SV=1[more]
FER1_DUNSA1.171e-1350.00Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1[more]
FER_TOBAC1.529e-1354.69Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]
FER1_CYAPA1.997e-1352.31Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 S... [more]
FER_PANGI2.608e-1354.69Ferredoxin OS=Panax ginseng PE=1 SV=1[more]

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Properties
Property NameValue
Genbank description14 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 30 5, mRNA sequence.