GE213449

Overview
NameGE213449
Unique NameGE213449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = -1
Query:  410 RPRSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 649
            +P  E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  130 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = -1
Query:  410 SELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 640
            S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ AEK+ +I
Sbjct:  137 SQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20
Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  410 PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 610
            PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  AR+AI KANPV+KA+K+D+I
Sbjct:  102 PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.796e-20
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = -1
Query:  410 ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 637
            E  ++ +  PK   +RC SC+K+VGLTGF+CRCG  +C +HRY++ H+C FDY+ A RD I K NPV+ AEK++KI
Sbjct:   86 EDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = -1
Query:  410 ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 637
            E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  134 EQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 38/59 (64.41%), Postives = 51/59 (86.44%), Query Frame = -1
Query:  419 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 595
            +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A K+
Sbjct:  103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 38/59 (64.41%), Postives = 51/59 (86.44%), Query Frame = -1
Query:  419 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 595
            +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A K+
Sbjct:  103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -1
Query:  410 PRSELSESVEAK--------------PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 646
            P ++  E VEAK              P + P RC +C++RVG+TGF+CRCG ++C +HRY+++H C FD++   +D I KANP++KA+KL+KI
Sbjct:   71 PPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 38/72 (52.78%), Postives = 55/72 (76.39%), Query Frame = -1
Query:  410 SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 625
            + E   ++ P+RC++C+KRVGLTGFKCRCG ++C  HRY + H C +D+++A R+ I KANP++KA KL KI
Sbjct:   99 TTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = -1
Query:  410 EAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 619
            E  PK   +RC SC+K+VGLTGFKCRCG  +C  HRY+D H C FDY+   R+ I K NP++KA+K+ KI
Sbjct:   91 EDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
The following BLAST results are available for this feature:
BLAST of GE213449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ZFAN6_HUMAN1.369e-2055.00AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN5_HUMAN1.788e-2055.84AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP1_ARATH5.204e-2058.21Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ6.796e-2052.63Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_BOVIN8.876e-2056.58AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP1_ORYSJ8.876e-2064.41Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI8.876e-2064.41Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH1.159e-1944.09Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH1.514e-1952.78Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ1.977e-1955.71Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank description329 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.