GE213426

Overview
NameGE213426
Unique NameGE213426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213426 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1
Query:   58 ELLPRGFLEMLD--GRGHIVK-WAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGL-----HLERKLERGEVERAIRRVMVDAEGREMRNRAEILKEKL 405
            E LP+GF E ++   +G IV+ W PQ ++L H + G F +HCGW S +E M  GVP+I  P   EQ   A+ V D   +G+      + ++L   EV R I+ V++  E +++R +A  + E +
Sbjct:  307 EALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMVFGVPIIGVPMAYEQPSNAKVVVDN-GMGMVVPRDKINQRLGGEEVARVIKHVVLQEEAKQIRRKANEISESM 429          
BLAST of GE213426 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.839e-12
Identity = 42/129 (32.56%), Postives = 70/129 (54.26%), Query Frame = 1
Query:   46 AEWIELLPRGFLEMLDGRGHIVK-WAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERG-----EVERAIRRVMVDAE---GREMRNRAEILKEKL 405
            AE    LP GFLE +  +G I   W  QQ +LAH + G +  H G++S +E++     ++  P  G+Q++ A+ VS   + G+ + R+ E G     +++ A+ +VMVD E   G+ +R   +  KE L
Sbjct:  319 AELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSVGCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDEDGYFGKEDIKEAVEKVMVDVEKDPGKLIRENQKKWKEFL 447          
The following BLAST results are available for this feature:
BLAST of GE213426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
FLRT_CITMA5.281e-1335.48Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]
UFOG_PETHY5.839e-1232.56Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]

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Properties
Property NameValue
Genbank description301 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.