GE213404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.708e-40 Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = -2 Query: 24 GRGRGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 521 G G DQPVIL +L+IP A +AL GV ME+ D AFPLL G+ A D + A V++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y Sbjct: 28 GEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMEAHADPMTAFKDVDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMY 195
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.843e-40 Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G D+P+ L +L+I PA +AL GV MEL D AFPLL GV +DA + G N+A++VG PR GMER D++ N +I+ AQ AL + AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V V+D+K + IWGNHS++QY Sbjct: 32 GPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.843e-40 Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G D+P+ L +L+I PA +AL GV MEL D AFPLL GV +DA + G N+A++VG PR GMER D++ N +I+ AQ AL + AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V V+D+K + IWGNHS++QY Sbjct: 32 GPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_NITEU (Malate dehydrogenase OS=Nitrosomonas europaea GN=mdh PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 8.260e-40 Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G+ QPVIL +LDIP + + L+GV MEL D AFPLL ++ T D + A +IA++VG PR +GMERKD++ N I++ Q AL Q + K+LVV NPANTN LI + AP + +N + + RLDHNRAL Q++ KLN VS ++ +I+WGNHSS+Q+ Sbjct: 31 GSSQPVILQLLDIPESGKVLDGVLMELQDCAFPLLTDIIVTHDPMIAFDQADIAILVGARPRGKGMERKDLLQTNGEIFREQGRALNQVVKRDAKILVVGNPANTNTLITMKNAPDLSPENFSGMLRLDHNRALSQVAMKLNQPVSHIRKMIVWGNHSSTQF 192
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.079e-39 Identity = 86/168 (51.19%), Postives = 111/168 (66.07%), Query Frame = -2 Query: 24 GRGRGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 521 G G DQPVIL +L+IP A +AL GV MEL D AFPLL+ V A D A ++A++VG PR GMERKD+++ N I+ AQ AL + A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q++ K V+ ++ +I+WGNHS + Y Sbjct: 28 GEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLQEVTAHADPKTAFKDADVALLVGARPRGPGMERKDLLTVNAQIFTAQGRALNEVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLAGKSGKAVAGIEKLIVWGNHSPTMY 195
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.079e-39 Identity = 77/162 (47.53%), Postives = 111/162 (68.52%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G DQPVIL +LD+P A A+ GV MEL D AFPLLK + TD A + A +VG PR +GMER+D++++N +I++ Q AL + A+ + KVLVV NPANTNA IL+ FAP +P I+ + RLDHNRA+ ++++ NV V + ++++WGNHS + + Sbjct: 32 GEDQPVILQLLDLPQAYGAVQGVVMELQDCAFPLLKEIQVATDPHAAFLNADYAFLVGSKPRTKGMERRDLLAENAAIFRTQGRALNEAASRDVKVLVVGNPANTNASILRRFAPDLPDDAISAMIRLDHNRAVSMLAQRCNVDVDSIADMVVWGNHSPTMF 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_XANC5 (Malate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mdh PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.409e-39 Identity = 87/168 (51.79%), Postives = 109/168 (64.88%), Query Frame = -2 Query: 24 GRGRGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 521 G G DQPVIL +L++P A AL GV MEL D AFPLL G+V T DA A V+IA++VG PR GMERKD++ N I+ AQ AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V+ ++ + +WGNHS + Y Sbjct: 27 GEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDVDIALLVGSRPRGPGMERKDLLLANAEIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLDPKNFTAMLRLDHNRALSQLSAKLGKPVAGIEKLAVWGNHSPTMY 194
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.409e-39 Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = -2 Query: 24 GRGRGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 521 G G DQPVIL +L+IP A +AL GV ME+ D AFPLL G+ A +D + A V++A++VG PR GMER D++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y Sbjct: 28 GEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMQAHSDPMTAFKDVDVALLVGARPRGPGMERADLLSANAQIFTAQGRALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMY 195
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_DELAS (Malate dehydrogenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=mdh PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.409e-39 Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = -2 Query: 24 GRGRGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 521 G G DQPVIL +L+IP A AL GV MEL D AFPLL G+ A +D ++A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D++ + +WGNHS + Y Sbjct: 28 GEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPLQAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKAGFKVGDIRKLTVWGNHSPTMY 195
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.840e-39 Identity = 86/168 (51.19%), Postives = 109/168 (64.88%), Query Frame = -2 Query: 24 GRGRGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 521 G G DQPVIL +L++P A AL GV MEL D AFPLL G+V T DA A V++A++VG PR GMERKD++ N I+ AQ AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V+ ++ + +WGNHS + Y Sbjct: 27 GEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDVDVALLVGSRPRGPGMERKDLLLANAEIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLDPKNFTAMLRLDHNRALSQLSAKLGKPVAGIEKLAVWGNHSPTMY 194 The following BLAST results are available for this feature:
BLAST of GE213404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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