GE213370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -1 Query: 22 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLY 309 +SPY NGGT +A+AG D+ ++A+DTR+S GYSI +RD K KL D V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY Sbjct: 27 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILY 122
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_TRYBB (Proteasome subunit beta type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16 Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = -1 Query: 13 KQHPA-WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTR-DYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPGMAQLLSNTLYLGR 324 K HP WSPY +NGGT AIAG++Y V+ ADTR++ + I TR D SK+ KL D+ +ASSG QAD LQ++L R YQ+ + K S +A+L S LY R Sbjct: 39 KGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRR 145
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_CAEEL (Proteasome subunit beta type-1 OS=Caenorhabditis elegans GN=pbs-6 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.951e-14 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = -1 Query: 13 WSPYDNNGGTCVAIAGADYCVIAADTRMSTG-YSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 309 W+PY GG+ AI+G ++ ++A+DTRM+ +ILTRD KI L D ++ +SGF DV L+K+L +R Y+ + MS A+LLS LY R Sbjct: 44 WNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRR 143
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_SCHPO (Probable proteasome subunit beta type-1 OS=Schizosaccharomyces pombe GN=pam1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.015e-13 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = -1 Query: 22 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLY 309 + PY NGGT VAIAG + ++A DTR GY+I TR ++ ++ D V+ +SGF+AD AL K + R +Y H ++MS A ++ LY Sbjct: 6 FDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLY 101
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_YEAST (Proteasome component C5 OS=Saccharomyces cerevisiae GN=PRE7 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.621e-11 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = -1 Query: 22 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLY 309 ++PY +NGGT + IAG D+ V+A DTR T YSI +R K+ D VM+++GF AD AL K Y HN K++S A+ + + LY Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLY 117 The following BLAST results are available for this feature:
BLAST of GE213370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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