GE213350

Overview
NameGE213350
Unique NameGE213350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20
Identity = 50/98 (51.02%), Postives = 69/98 (70.41%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESE-EAKKGMFVRGYTY 595
            G++FLSGGQSE +ATLNLNA+NQ     PW ++FSY RALQ + L  W G+ EN  AAQ+ LL RA+ NSLA +GKY+ +  ++  A + +FV  ++Y
Sbjct:  269 GVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 595
            GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  267 GITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 595
            GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  267 GITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.664e-20
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 595
            GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  267 GITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.786e-20
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            G+ FLSGGQSE +A++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  GKY        A   ++ + Y Y
Sbjct:  263 GVAFLSGGQSEEDASINLNSINVLGPHPWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAGGSTAGASLYEKKYVY 358          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.250e-20
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 595
            G+ FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +F+  + Y
Sbjct:  267 GVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.392e-19
Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = -3
Query:  311 IMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 592
            I+FLSGGQSE EATLNLNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LG Y  +    E A + + V+ Y Y
Sbjct:  262 IVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.392e-19
Identity = 52/98 (53.06%), Postives = 62/98 (63.27%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 595
            GI FLSGGQSE +A+LNLNA+NQ P   PW +SFSY RALQ +VLK W G P N  AA+K    RA  N LA  GKY   G S   A + +F+  + Y
Sbjct:  267 GITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            GI FLSGGQSE++AT NLN +N+   P PW ++FS+ RALQ +VL TW+G+ EN  AAQ+ LL  AKAN  A +GK+     +    K +FV  + Y
Sbjct:  267 GITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19
Identity = 51/97 (52.58%), Postives = 65/97 (67.01%), Query Frame = -3
Query:  311 IMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKY-SAEGESEEAKKGMFVRGYTY 592
            ++FLSGGQSE EA++NLNA+NQ     PW +SFS+ RALQ + LK W G+ EN +AAQ +LL RAKANS A LG Y  A      A + + V+ Y Y
Sbjct:  263 VVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
The following BLAST results are available for this feature:
BLAST of GE213350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALF1_CAEEL3.664e-2051.02Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOA_PONAB3.664e-2052.04Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_PANTR3.664e-2052.04Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_HUMAN3.664e-2052.04Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALF2_PLABA4.786e-2050.00Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOA_RABIT6.250e-2050.00Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALF_ORYSJ1.392e-1952.58Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF2_LAMJA1.392e-1953.06Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALF_SCHMA2.375e-1949.48Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF2_PEA2.375e-1952.58Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank description214 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.