GE213350

Overview
NameGE213350
Unique NameGE213350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            G+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G  EN +AA +  L RA+AN LA  GKY + G    A + ++V  + Y
Sbjct:  267 GVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            G+ FLSGGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   G+   A + ++V  + Y
Sbjct:  267 GVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.911e-19
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEA-KKGMFVRGYTY 595
            GI FLSGGQSE EA+++LNA+NQ P   PW ++FSY RALQ + L  WQG+  N  A Q+  + RAK N LA  G+Y   G +++A ++ ++   Y Y
Sbjct:  267 GICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.911e-19
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 595
            GI FLSGG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+ EN +A Q++ + RA ANS A  G+Y   G S+ A  + +F   YTY
Sbjct:  267 GICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.026e-19
Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            G+ FLSGG SEV A+  LNAMN  P   PW ++FSYARALQ++ +K W G+    EA +++ + RAK NSLAQLGKY+   + ++  + ++V G TY
Sbjct:  277 GVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKYN-RADDDKDSQSLYVAGNTY 372          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 93.5893 bits (231), Expect = 9.026e-19
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            G+ FLSGGQSE EAT+NL+A+N  P   PW ++FSY RALQ +VL+ W G+ EN  A Q  LL RAKAN  A  GKY A G +      +FV  + Y
Sbjct:  266 GVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 92.8189 bits (229), Expect = 1.540e-18
Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            G+ FLSGGQSE EA+LNLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G+Y   G+   A + +++  + Y
Sbjct:  267 GVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.011e-18
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEG-ESEEAKKGMFVRGYTY 595
            G+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA LGKY   G +S  A + ++V  + Y
Sbjct:   40 GVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 595
            GI FLSGGQSE +A+++LNA+N+     PW ++FSY RALQ +VLK W G+ EN +AAQ  L+ RAK N  A  G+Y   G    A + +FV  + Y
Sbjct:  267 GITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = -3
Query:  311 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 595
            G+ FLSGGQSE EA+ NLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N EAA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  267 GVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of GE213350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALDOC_CARAU4.051e-1948.45Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDOC_RAT5.291e-1946.39Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOB_SPAAU6.911e-1946.94Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_SHEEP6.911e-1951.02Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALF_TRYBB9.026e-1948.45Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_DROME9.026e-1951.55Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOC_MOUSE1.540e-1844.33Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOC_CHICK2.011e-1846.94Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF1_LAMJA2.626e-1848.45Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_PANTR2.626e-1845.92Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]

Pages

back to top
Properties
Property NameValue
Genbank description214 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.