GE213350

Overview
NameGE213350
Unique NameGE213350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.468e-17
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = -3
Query:  344 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEA 595
            G+ FLSGGQSE EA++NL+A+N      PW ++FS+ RALQ + LKTW+G+ EN  AA +  + RA+ NSLA  GKY+  G+S  A
Sbjct:  267 GVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGA 352          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.151e-16
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = -3
Query:  311 IMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 592
            I FLSGG SE +ATLNLNA+ + P   PW +SFSY RALQ + L  W G+  N +A Q++ + RA AN  A  G+Y   G S  A  + +F   YTY
Sbjct:  268 ICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  371 GIMFLSGGQSEVEATLNLNAMNQA-PNPWHVSFSYARALQNTVLKTW-QGRPENTEAAQKSLLVRAKANSLAQLGKY 595
            GI+FLSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W Q    N   AQ+ +  RAK N LA LGK+
Sbjct:  256 GIVFLSGGQTDAQSTAHLNAMNQLDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKW 332          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  371 GIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTW-QGRPENTEAAQKSLLVRAKANSLAQLGKY 595
            GI+FLSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W Q    N   AQ+ +  RAK N LA LGK+
Sbjct:  256 GIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKW 332          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = -3
Query:  371 GIMFLSGGQSEVEATLNLNAMNQAPN-PWHVSFSYARALQNTVLKTW-QGRPENTEAAQKSLLVRAKANSLAQLGKY 595
            GI+FLSGGQ++ ++T +LN M+Q  N PW +SFSY RA+Q   LK W +    N   AQ+ +  RAK N LA LGK+
Sbjct:  256 GIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKW 332          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = -3
Query:  371 GIMFLSGGQSEVEATLNLNAMNQAPN-PWHVSFSYARALQNTVLKTW-QGRPENTEAAQKSLLVRAKANSLAQLGKY 595
            GI+FLSGGQ++ ++T +LN M+Q  N PW +SFSY RA+Q   LK W +    N   AQ+ +  RAK N LA LGK+
Sbjct:  256 GIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKW 332          
BLAST of GE213350 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = -3
Query:  443 GIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPE 595
            GI FLSGGQSE +AT+NLNA+NQ P   PW ++FSY RALQ +VLK W G+ E
Sbjct:   48 GITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of GE213350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALDCA_DANRE6.468e-1751.16Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALDOB_RAT7.151e-1647.42Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF1_XYLFA1.491e-1353.25Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT1.948e-1353.25Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP8.182e-1249.35Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANAC8.182e-1249.35Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_LYMST1.069e-1164.15Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank description214 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.