GE213349

Overview
NameGE213349
Unique NameGE213349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.850e-59
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESE 388
            RYLAEFKTG ERKEAAE+TL+AYK+AQDIAN ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDG DEIKE +K ++E
Sbjct:  133 RYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEPSKADNE 255          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.272e-59
Identity = 111/123 (90.24%), Postives = 119/123 (96.75%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESE 388
            RYLAEFKTG ERKEAAE+TL+AYK+AQDIAN ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA++DTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE +K ++E
Sbjct:  132 RYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEPSKADNE 254          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 1.080e-58
Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE----AAKPESEQQ 394
            RYLAEFK+G ERK+AAE TLTAYKAAQDIAN+ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD AD+IKE    AAKP  EQQ
Sbjct:  138 RYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDVADDIKEAAPAAAKPADEQQ 266          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 1.843e-58
Identity = 112/125 (89.60%), Postives = 118/125 (94.40%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQQ 394
            RYLAEFKTG ERK+AAE TLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD+  +EIKEAA P+  ++
Sbjct:  139 RYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIKEAAAPKPAEE 263          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.407e-58
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 391
            RYLAEFK+GAERK+AAESTLTAYK+AQDIAN EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAA   +++
Sbjct:  136 RYLAEFKSGAERKDAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGNDE 259          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 4.106e-58
Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESE 388
            RYLAEFKTG ERK AAE+TL+AYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQDD A+E+KEA KP+ +
Sbjct:  137 RYLAEFKTGDERKLAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDTAEEVKEAPKPDDQ 259          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 9.146e-58
Identity = 111/124 (89.52%), Postives = 116/124 (93.55%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 391
            RYLAEFKTGAERKEAAE+TL+AYK+AQDIAN ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAEL TLGEESYKDSTLIMQL  DNLTLWTSDMQDDG DEIKE +K E +Q
Sbjct:  132 RYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELGTLGEESYKDSTLIMQLFCDNLTLWTSDMQDDGTDEIKEPSKAEEQQ 255          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 4.539e-57
Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEI-KEAAKPE 382
            RYLAEFKTGA+RKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF EAIAELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQD+ ADEI +EAAK +
Sbjct:   89 RYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFVEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDEAADEITEEAAKQQ 210          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.011e-56
Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESE 388
            RYLAEFKTGAERK+AA++TL AY+AAQDIA  EL+PTHPIRLGLALNFSVFYYEILNSPDRAC LAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDG DE+++A KPE E
Sbjct:  141 RYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMRDATKPEDE 263          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.321e-56
Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 385
            RYLAEFKTG ERKEAAE+TL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD  DD  D+IKEA+KPES
Sbjct:  134 RYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKEASKPES 255          
The following BLAST results are available for this feature:
BLAST of GE213349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14335_SOLLC4.850e-5991.0614-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
14332_SOLTU8.272e-5990.2414-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
14331_ARATH1.080e-5889.9214-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14334_ARATH1.843e-5889.6014-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
1433A_VICFA2.407e-5890.3214-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
1433_HELAN4.106e-5890.2414-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
1433A_TOBAC9.146e-5889.5214-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
1433_SPIOL4.539e-5792.6214-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
14331_ORYSJ1.011e-5686.9914-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
14334_SOLLC1.321e-5690.1614-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]

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Properties
Property NameValue
Genbank description213 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.