GE213349

Overview
NameGE213349
Unique NameGE213349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5473 contig Csv1_Contig5473:552..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.725e-56
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 385
            RYLAEFKTGAERKEAAEST+ AYKAAQDIA A+LAPTHPIRLGLALNFSVFYYEILNSPD+ACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ +DG DE+KEA+K ++
Sbjct:  131 RYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKEASKGDA 252          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.725e-56
Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 391
            RYLAEFK GAERKEAAESTL AYK+A DIA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFD+AIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM D+  DEIKEA+KP+  +
Sbjct:  132 RYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKEASKPDGAE 255          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 2.942e-56
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESE 388
            RYLAEFK+GAERKEAAE+TL AYK+AQDIA A+L  THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD+AIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  +DG DEIKEAAKPE E
Sbjct:  136 RYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIKEAAKPEGE 258          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.118e-55
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE-AAKPESEQQ 394
            RYLAEFKTGAERKEAAE+TL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD  ++G DEIKE AAK ES ++
Sbjct:  135 RYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAAAKRESGEE 260          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.118e-55
Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPE 382
            RYLAEFK+G ERK+AAEST+ AYKAAQDIA A+LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLLRDNLTLWTSD  DDG DEIKEAA P+
Sbjct:  140 RYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPK 260          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.491e-55
Identity = 107/119 (89.92%), Postives = 114/119 (95.80%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAK 376
            RYLAEFK+GAERKEAAESTL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ ++  DEIKEA+K
Sbjct:  136 RYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDINEEAGDEIKEASK 254          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.253e-55
Identity = 109/125 (87.20%), Postives = 117/125 (93.60%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD-GADEIKEAAKPESEQ 391
            RYLAEFKTGAERKEAAESTL AYK+AQDIA A+LAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLW SD+ D+ G DEIKEA+K E E+
Sbjct:  133 RYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAGGDEIKEASKHEPEE 257          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.249e-55
Identity = 107/122 (87.70%), Postives = 114/122 (93.44%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 385
            RYLAEFKTGAERK+AAE+T+ AYKAAQDIA AEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D A+EIKEA K ES
Sbjct:  137 RYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEIKEAPKGES 258          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.247e-55
Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPE 382
            RYLAEFKTGAERKEAAESTL AYK+AQDIA A+LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ D   DEIKE +K +
Sbjct:  134 RYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKETSKQQ 254          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 2.109e-54
Identity = 105/124 (84.68%), Postives = 115/124 (92.74%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 391
            RYLAEFKTGAERK+AAE+T+ AYKAAQDIA AEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D A+EI+EA K +S +
Sbjct:  137 RYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEEIREAPKRDSSE 260          
The following BLAST results are available for this feature:
BLAST of GE213349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14333_ORYSJ1.725e-5687.7014-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14333_ARATH1.725e-5687.1014-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14336_ORYSJ2.942e-5688.6214-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
1433_MESCR1.118e-5588.1014-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14334_ORYSJ1.118e-5588.4314-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
1433_LILLO2.491e-5589.9214-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14337_ARATH3.253e-5587.2014-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14335_ORYSJ4.249e-5587.7014-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433A_SOYBN7.247e-5588.4314-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14332_ORYSJ2.109e-5484.6814-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank description213 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.