GE213349

Overview
NameGE213349
Unique NameGE213349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5473 contig Csv1_Contig5473:552..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.109e-54
Identity = 105/124 (84.68%), Postives = 116/124 (93.55%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 391
            RYLAEFKTGAERK+AAE+T+ AYKAAQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D A+EI+EA K +S +
Sbjct:  136 RYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDPAEEIREAPKRDSSE 259          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.597e-54
Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAA-KPESE 388
            RYLAEFK GAERKEAAE+TL AYK+AQDIA A+L  THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELD+LGEESYKDSTLIMQLLRDNLTLWTSD  ++G DEIKEAA KPE E
Sbjct:  136 RYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAASKPEGE 259          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.597e-54
Identity = 108/123 (87.80%), Postives = 113/123 (91.87%), Query Frame = 2
Query:   20 RYLAEFKTGA-ERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 385
            RYLAEFKTGA ERKEAAE+TL AYK+AQDIA AEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD+AIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  DD  DEI+E +K ES
Sbjct:  132 RYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTTDDAEDEIREGSKQES 254          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 4.697e-54
Identity = 105/119 (88.24%), Postives = 112/119 (94.12%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAK 376
            RYLAEFKTGAERKEAAESTL AYK+AQDIA A+LAPTHPIRLGLALNFSVFYYEILNS DRAC+LAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ D+  D+IKEA K
Sbjct:  135 RYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEAPK 253          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 3.977e-53
Identity = 103/119 (86.55%), Postives = 112/119 (94.12%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAK 376
            RYLAEFKTGAERK+AAE+T+ AYKAAQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLL DNLTLWTSD+ +D A+EI+EA K
Sbjct:  136 RYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPAEEIREAPK 254          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.742e-52
Identity = 100/122 (81.97%), Postives = 113/122 (92.62%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 385
            RYLAEFK+G ERK+AAE+T+ AYKAAQ+IA AEL PTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +D A+E+K+A K ES
Sbjct:  137 RYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEMKDAPKGES 258          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.182e-51
Identity = 102/123 (82.93%), Postives = 110/123 (89.43%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESE 388
            RYLAEFKTGA+RKEAAE TL AYKAAQDIA  +L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+LGEESYKDSTLIMQLLRDNLTLWTSDMQD  A + +E A  + E
Sbjct:  133 RYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQDPAAGDDREGADMKVE 255          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.019e-50
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 334
            RYLAEFKTGAERKEAAE+TL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNS DRACNLAKQAFD+AIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  134 RYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 238          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 9.167e-50
Identity = 101/126 (80.16%), Postives = 108/126 (85.71%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKP-ESEQQ 394
            RYLAEF TG +RKEAAE++L AYKAA DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AIAELDTL EESYKDSTLIMQLLRDNLTLWTSDMQ DG ++ KEA +  E E Q
Sbjct:  130 RYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDENQ 255          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 9.167e-50
Identity = 101/126 (80.16%), Postives = 108/126 (85.71%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKP-ESEQQ 394
            RYLAEF TG +RKEAAE++L AYKAA DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AIAELDTL EESYKDSTLIMQLLRDNLTLWTSDMQ DG ++ KEA +  E E Q
Sbjct:  130 RYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDENQ 255          
The following BLAST results are available for this feature:
BLAST of GE213349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14331_MAIZE2.109e-5484.6814-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
1433A_HORVU3.597e-5487.1014-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14331_SOLTU3.597e-5487.8014-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
14335_ARATH4.697e-5488.2414-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14332_MAIZE3.977e-5386.5514-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
1433B_HORVU5.742e-5281.9714-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
1433_CHLRE2.182e-5182.9314-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
1433E_TOBAC7.019e-5094.2914-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433E_SHEEP9.167e-5080.1614-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]
1433E_RAT9.167e-5080.1614-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]

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Properties
Property NameValue
Genbank description213 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.