GE213349

Overview
NameGE213349
Unique NameGE213349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 6.799e-45
Identity = 87/125 (69.60%), Postives = 104/125 (83.20%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQQ 394
            RYLAEF +G  R++A  S+L AYK A +IA  EL PTHPIRLGLALNFSVFYYEI NSPD+AC+LAKQAFD+AIAELDTL EESYKDSTLIMQLLRDNLTLWTSD+ + G ++ ++  + + +QQ
Sbjct:  132 RYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQQQQQQQQQQQ 256          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 179.104 bits (453), Expect = 1.160e-44
Identity = 88/125 (70.40%), Postives = 102/125 (81.60%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQQ 394
            RYLAEF +G  R++A  ++L AYK A +IA  EL PTHPIRLGLALNFSVFYYEI NSPD+AC+LAKQAFD+AIAELDTL EESYKDSTLIMQLLRDNLTLWTSDM + G  E ++  +   +QQ
Sbjct:  132 RYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESGQAEDQQQQQQHQQQQ 256          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.160e-44
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 364
            RYLAEFK G ++KE AE +L AY+AA   A AELAPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELD+L E+SYKDSTLIMQLLRDNLTLWTSD+ +D  D  K
Sbjct:  133 RYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQK 247          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 3.374e-44
Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ---------DDGADEIKEAAKPESEQQ 394
            RYLAEF  G +R+ +A+ +L  YKAA +IA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD +          +GA E   +  PE E +
Sbjct:  132 RYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYSAAAAGGNTEGAQENAPSNAPEGEAE 265          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.675e-43
Identity = 85/110 (77.27%), Postives = 101/110 (91.82%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDG 349
            RYLAEFK+GA+R+EAA+ +L AY+AA   A+ EL+ THPIRLGLALNFSVFYYEILNSP+RAC+LAK+AFDEAIAELD+L E+SYKDSTLIMQLLRDNLTLWTSD+++ G
Sbjct:  131 RYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLEEGG 240          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.125e-42
Identity = 83/104 (79.81%), Postives = 93/104 (89.42%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 331
            RYLAEF  G  RK++A+ +L AYKAA ++A  EL PTHPIRLGLALNFSVFYYEILN+PD+AC+LAKQAFD+AIAELDTL EESYKDSTLIMQLLRDNLTLWTS
Sbjct:  129 RYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 232          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 7.036e-42
Identity = 87/125 (69.60%), Postives = 99/125 (79.20%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQQ 394
            RYLAEF    +RKEAA+ +L AYKAA D+A  EL PTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFD+A+A+L+TL E+SYKDSTLIMQLLRDNLTLWT         ++ EA     EQQ
Sbjct:  131 RYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIMQLLRDNLTLWT---------DLSEAPAATEEQQ 246          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.200e-41
Identity = 90/126 (71.43%), Postives = 101/126 (80.16%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ-DDGADEIKEAAKPESEQQ 394
            RYLAEF  G   KEAA+S+L AYKAA DIA AEL PT P+RLGLALNFSVFYYEIL+SP+ AC+LAKQ FDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD + +  A E   AA   SE +
Sbjct:  131 RYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYNQSAKEEAPAAAAASENE 256          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.016e-40
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 355
            RYLAE  TG  R    + + TAY+ A DI+  ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q D A+
Sbjct:  130 RYLAEVATGDARNTVVDDSQTAYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAE 241          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.016e-40
Identity = 82/110 (74.55%), Postives = 91/110 (82.73%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDG 349
            RYLAE  TG  R    E +  AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q DG
Sbjct:  129 RYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDG 238          
The following BLAST results are available for this feature:
BLAST of GE213349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
BMH2_YEAST6.799e-4569.60Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
BMH1_YEAST1.160e-4470.40Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
14339_SOLLC1.160e-4476.5214-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
RAD24_SCHPO3.374e-4468.66DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
14311_ARATH1.675e-4377.2714-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
1433_TRIHA4.125e-4279.8114-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_CANAL7.036e-4269.6014-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
RAD25_SCHPO1.200e-4171.43DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433Z_DROME1.016e-4073.2114-3-3 protein zeta OS=Drosophila melanogaster GN=... [more]
1433Z_BOMMO1.016e-4074.5514-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]

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Properties
Property NameValue
Genbank description213 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.