GE213349

Overview
NameGE213349
Unique NameGE213349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5473 contig Csv1_Contig5473:552..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.016e-40
Identity = 80/115 (69.57%), Postives = 96/115 (83.48%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 364
            RYLAEFKTG ++KE ++ +L AY+ A   A AEL  THPIRLGLALNFSVFYYEI+NSP+RAC LAKQ FDEAI+ELD+L E++YKD TLI+QLLRDNLTLWTSD+ +DG +  K
Sbjct:  133 RYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPK 247          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.263e-40
Identity = 86/124 (69.35%), Postives = 98/124 (79.03%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 391
            RYLAE  TG ER++  E +  AY  A DIA  ++ PTHPIRLGLALNFSVFYYEILN+PDRAC+LAKQAFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTS   D G D+  +A  P+  Q
Sbjct:   96 RYLAEVATGDERQKVIEESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTS---DTGGDD--DANAPDEHQ 214          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_AEDAE (14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.956e-40
Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE 367
            RYLAE  TG  R    + +  AY+ A +I+  ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD Q DG DE +E
Sbjct:  130 RYLAEVATGETRNTVVDDSQAAYQDAFEISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDG-DEPQE 244          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.861e-40
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTL-IMQLLRDNLTLWTSD 334
            RYLAEF++  ERK +A   L AY+ A D AN +L PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AIAELDTL EESYKDSTL IMQLLRDNLTLWTSD
Sbjct:  127 RYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDNLTLWTSD 232          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.042e-40
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 364
            RYL+E  +G  ++E   ++  AY+ A +I+ +E+ PTHPIRLGLALNFSVFYYEILNSPD+AC+LAK AFDEAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q + AD ++
Sbjct:  127 RYLSEVASGDSKQETVANSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPDKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSETQGEEADNVE 241          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 8.600e-40
Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 364
            RYL+E  +G  ++E   S+  AY+ A +I+ +E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q + AD ++
Sbjct:  127 RYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEADNVE 241          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 8.600e-40
Identity = 81/112 (72.32%), Postives = 92/112 (82.14%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 355
            RYLAE   G ++K   E +  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAIAELDTL EESYKDSTLIMQLLRDNLTLWTSD Q D A+
Sbjct:  127 RYLAEVAAGDDKKGIVEQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.916e-39
Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 355
            RYLAE   G ++K   + +  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAIAELDTL EESYKDSTLIMQLLRDNLTLWTSD Q D A+
Sbjct:  127 RYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.916e-39
Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 355
            RYLAE   G ++K   + +  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAIAELDTL EESYKDSTLIMQLLRDNLTLWTSD Q D A+
Sbjct:  127 RYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of GE213349 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.916e-39
Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 2
Query:   20 RYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 355
            RYLAE   G ++K   + +  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAIAELDTL EESYKDSTLIMQLLRDNLTLWTSD Q D A+
Sbjct:  127 RYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
The following BLAST results are available for this feature:
BLAST of GE213349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14338_SOLLC1.016e-4069.5714-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14332_SCHMA2.263e-4069.3514-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
1433Z_AEDAE2.956e-4071.5514-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta... [more]
1433_FUCVE3.861e-4079.2514-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
143BB_XENLA5.042e-4068.7014-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y... [more]
143BA_XENLA8.600e-4068.7014-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y... [more]
1433Z_CHICK8.600e-4072.3214-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
1433Z_SHEEP1.916e-3971.4314-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P... [more]
1433Z_RAT1.916e-3971.4314-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_PONAB1.916e-3971.4314-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]

Pages

back to top
Properties
Property NameValue
Genbank description213 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.