GE213317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = 3 Query: 54 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 536 P + Y K E L Y + G+E R+ R N YGP GR + F +A + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A+++ D I P E R D + KE LGW P + L+ GL Sbjct: 168 PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKDGL 330
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14 Identity = 50/176 (28.41%), Postives = 85/176 (48.30%), Query Frame = 3 Query: 39 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP-FNLGNPGEFTMLELAQVVQETID-PNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFR 560 W +P+ S Y K ++ L + YH+ G++V + R N YGPR + +++ FV + L + VYGDG+ R + VSD GL + G +++G E T LEL +++ E P ++I F + + + D S+ LG+ P+V G+ + V +R Sbjct: 140 WAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWYR 313
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 46/164 (28.05%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 69 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH-VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDF 557 S Y KR+ E + YH G+++ R F YG D F L + + VY G R F ++SD+V+G++R ++ + FNLGN ++ +++++ ++ AK +F P + D + D+S++++LLG++PKV++ +GL + F Sbjct: 155 SLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGRPD--MAYFKFAKNILLGKEIEVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWF 316
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.346e-14 Identity = 54/181 (29.83%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 54 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG-PFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDP-------------HKRK--PDISRAKELLGWEPKVSLRKGLPKMV 548 P S Y K ++ L +H G+ V N YGP + +++ +A+AL EPL VYGDGKQ R + FVSD E + ++ VG +N+G E +E+ Q + +D + RP + P H R+ D S+ K+ LGWEP + +G+ + V Sbjct: 151 PYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLD-----QHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTV 324
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.636e-13 Identity = 53/177 (29.94%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 54 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG-PFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDP-------------HKRK--PDISRAKELLGWEPKVSLRKGL 536 P S Y K ++ L +H G+ V N YGP + +++ +A+AL EPL VYGDGKQ R + FVSD E + ++ VG +N+G E +E+ Q + +D + RP + P H R+ D S+ K+ LGWEP + +G+ Sbjct: 151 PYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLD-----QHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGI 320
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12 Identity = 50/168 (29.76%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 51 NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE-GLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 548 +PI S Y K E Y+R G+E I R N YG R + V+S F+ + L+ + ++GDG QTR F +V D+ + LM L + N+G E ++ EL +++ I + + E + ++ DI +A E LGW+P++ L++G+ ++V Sbjct: 132 HPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKNEI--VNIGTGKETSVNELFDIIKHEIGFRGEAIYDKPREGEVYRIYLDIKKA-ESLGWKPEIDLKEGIKRVV 296
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12 Identity = 50/170 (29.41%), Postives = 79/170 (46.47%), Query Frame = 3 Query: 75 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR-LMEGEHVGPFNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--RKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQ 563 Y K AE Y V I R N YGP + RV+ F++ ++G G Q R+F + +D+VE + L +GE +N+G E ++++LA Q+++ET + + D PH R P S LGW+PKV +G+ K V+ +R+ Sbjct: 166 YASSKAAAECFVQSYWERYKFPVVITRSSNVYGPHQYPE--RVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRK 333
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11 Identity = 47/166 (28.31%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 75 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-MRLMEGEHVGPFNLGNPGEFTMLELAQVVQETI--DPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQ 563 Y K AE L M Y R G+ V R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E + L +GE +N+G E ++++A+ + + DP + I+F N + + D + K+ LGW+ + + GL K + + Q Sbjct: 161 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKK-LGWQERTNWEDGLKKTMDWYTQ 323
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: TGDS_BOVIN (dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 47/170 (27.65%), Postives = 80/170 (47.06%), Query Frame = 3 Query: 75 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP-FNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--RKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQ 563 Y K AE Y V I R N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++ G +N+G E ++L+LA Q+++ET + + +D P R P S LGW PKV ++G+ K ++ +R+ Sbjct: 166 YASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333
BLAST of GE213317 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 75 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-MRLMEGEHVGPFNLGNPGEFTMLELAQVVQET--IDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 551 Y K AE L M Y R G+ V R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E + L +GE +N+G E ++++A + + IDP++ I++ N + + D + K+ LGW + + +GL K ++ Sbjct: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKK-LGWCERTNWEEGLRKTME 317 The following BLAST results are available for this feature:
BLAST of GE213317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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