GE213316

Overview
NameGE213316
Unique NameGE213316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.465e-31
Identity = 62/105 (59.05%), Postives = 85/105 (80.95%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            I ESGEHIVAG GELHLEICL+DLQDD   G  +  S PVV++RETV  +S  T +SKS NKHNR+Y++A+P++E L+ AI++G++ PRDD KAR++I+++E+GW
Sbjct:  522 ISESGEHIVAGTGELHLEICLQDLQDDH-AGVPLKISPPVVTYRETVTNESSMTALSKSQNKHNRIYLKAQPIDEELSLAIEEGKVHPRDDFKARARIMADEYGW 625          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 1.440e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ W
Sbjct:  538 IEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEW 641          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 131.339 bits (329), Expect = 1.440e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ W
Sbjct:  538 IEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEW 641          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 1.440e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ W
Sbjct:  538 IEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEW 641          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.440e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ W
Sbjct:  538 IEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEW 641          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 1.440e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ W
Sbjct:  538 IEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEW 641          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.457e-30
Identity = 60/103 (58.25%), Postives = 84/103 (81.55%), Query Frame = 3
Query:   33 ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            E+GEHIVAG GELHLEICL+DL++D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A P+EE ++ AI+ G+I PRDD KAR++++++EFGW
Sbjct:  524 ETGEHIVAGTGELHLEICLQDLENDH-AGVPLKISPPVVAYRETVETESSQTALSKSPNKHNRIYLKAEPIEEEVSLAIESGKINPRDDLKARARVMADEFGW 625          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.457e-30
Identity = 61/106 (57.55%), Postives = 87/106 (82.08%), Query Frame = 3
Query:   24 TIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            ++ ESGEHIVAG GELHLEICL+DL++D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A+P++E ++ AI+ G+I PRDD KAR++I+++EFGW
Sbjct:  521 SMSESGEHIVAGTGELHLEICLQDLENDH-AGIPLKISPPVVAYRETVEGESSQTALSKSPNKHNRIYLKAQPIDEEVSLAIEGGKINPRDDFKARARIMADEFGW 625          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.335e-30
Identity = 63/104 (60.58%), Postives = 77/104 (74.04%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EESGEHIVAGAGELHLE+CLK+LQ+D+  G  +I ++PVVSFRET+ E S    +SKS N  NRL+M A P  EGLAE I+ G I P  D K R+K LSE++GW
Sbjct:  520 EESGEHIVAGAGELHLEVCLKELQEDYCSGVPLIVTEPVVSFRETITEPSRIQCLSKSANNQNRLFMRAFPFPEGLAEDIEAGEIKPDTDFKERAKFLSEKYGW 623          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.547e-29
Identity = 59/105 (56.19%), Postives = 84/105 (80.00%), Query Frame = 3
Query:   27 IEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            + ESGEHIVAG GELHLEICL+DL+ D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A P++E ++ AI++G I PRDD KAR++I+++++GW
Sbjct:  522 MSESGEHIVAGTGELHLEICLQDLEHDH-AGVPLKISPPVVAYRETVESESSQTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGW 625          
The following BLAST results are available for this feature:
BLAST of GE213316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
EF2_PICPA6.465e-3159.05Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_PONAB1.440e-3062.86Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN1.440e-3062.86Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CHICK1.440e-3062.86Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_CALJA1.440e-3062.86Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_BOVIN1.440e-3062.86Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_SACCA2.457e-3058.25Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_KLULA2.457e-3057.55Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_ENTHI9.335e-3060.58Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_YEAST3.547e-2956.19Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]

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Properties
Property NameValue
Genbank description173 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.