GE213316

Overview
NameGE213316
Unique NameGE213316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  W
Sbjct:  432 EETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI 284
            +E+GEH+++G GELHL++ L  +++D+    E+  SDP+V +RETV EK       KSPNKHNR Y E  PL+  + +AI+DG I
Sbjct:  426 QETGEHLISGMGELHLDVTLYRIKNDYK--VEVETSDPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDI 507          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGW 341
            EE+GE++++G G LH+E+ L+ L+D++  G +++ + P+V +RE+V  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL ++  W
Sbjct:  432 EETGEYLLSGMGFLHVEVSLQLLKDNY--GVDVVTTPPIVVYRESVRNKS-QVFEGKSPNKHNKFYISVEPLNDKTIELISNGTIKEDMDSKEMAKILRDQADW 532          
BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.915e-15
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 3
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFG 338
            EE+G+H+V+G GELHLEI    +++    G +I  S+P+V +RE V       V  KSPNKHN+ Y+   P+EE + EAI++G+  P +  K   +    E+G
Sbjct:  950 EETGQHLVSGMGELHLEIIAHRIKER---GVDIKVSEPIVVYREGVFGVCDDEVEGKSPNKHNKFYVTVEPVEEEIVEAIEEGKFNPEEMSKKELEETLMEYG 1049          
The following BLAST results are available for this feature:
BLAST of GE213316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
EF2_SULSO1.709e-1538.46Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY1.709e-1538.46Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN1.709e-1538.46Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM1.709e-1538.46Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIL1.709e-1538.46Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK1.709e-1538.46Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA1.709e-1538.46Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_THEAC2.232e-1547.06Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_METS52.232e-1538.46Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METKA2.915e-1539.81Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]

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Properties
Property NameValue
Genbank description173 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.