GE213316

Overview
NameGE213316
Unique NameGE213316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of GE213316 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.956e-11
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 3 
Query:   30 EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI 284
            E++GEH+++G GELHLE+  + ++ +   G  +   +P+V FRE   ++S R V  +SPN HNR Y+   PLE+ + E I  G +
Sbjct:  428 EDTGEHLISGQGELHLEVITQRIERN--QGIPVNTGEPIVVFREAPQQES-REVEGRSPNNHNRFYITVEPLEDDIVETIKMGDV 509
The following BLAST results are available for this feature:
BLAST of GE213316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
EF2_NATPD1.956e-1138.82Elongation factor 2 OS=Natronomonas pharaonis (str... [more]

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Properties
Property NameValue
Genbank description173 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.