GE213314

Overview
NameGE213314
Unique NameGE213314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_MOUSE (Granulocyte-macrophage colony-stimulating factor OS=Mus musculus GN=Csf2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.147e-28
Identity = 67/144 (46.53%), Postives = 92/144 (63.89%), Query Frame = -3
Query:   13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMND-TEVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441
            MWLQNLL LG VV S S           PW+HV+AIKEAL+L +   D    +N+  EVVS +F  ++ TC+QT LK+++ GL+G+ T L G+L M A+ Y+ +CPPTPET C TQ  ++ +F + LK FL  I F+  +P QK
Sbjct:    1 MWLQNLLFLGIVVYSLSAPTRSPITVTRPWKHVEAIKEALNLLD---DMPVTLNEEVEVVSNEFSFKKLTCVQTRLKIFEQGLRGNFTKLKGALNMTASYYQTYCPPTPETDCETQVTTYADFIDSLKTFLTDIPFECKKPGQK 141          
The following BLAST results are available for this feature:
BLAST of GE213314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CSF2_MOUSE2.147e-2846.53Granulocyte-macrophage colony-stimulating factor O... [more]

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Properties
Property NameValue
Genbank description171 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.