GE213293

Overview
NameGE213293
Unique NameGE213293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 8.863e-70
Identity = 143/203 (70.44%), Postives = 157/203 (77.34%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 721
            YAVGQLKE++GKKLVSATKEGLKLD+ SE+EKK KE  K+ FE LCK IKD+LG              SPCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD          LTSGFSLDDPNTF  RIHRMLKLGLSI EE+    DADMP LE+  ++   SKMEEVD
Sbjct:  300 YAVGQLKEYDGKKLVSATKEGLKLDDDSEEEKKKKEEKKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEEEAVEDADMPALEETGEE---SKMEEVD 499          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57
Identity = 119/210 (56.67%), Postives = 142/210 (67.62%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED---------AGDADADMPPLEDAADDAEGSKMEEVD 721
            Y V QLK+F+GK LVS TKEGL+L E EDEKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PIME LR++A+ADKNDK+VKD          L+SGFSLDDP T  NRI+RM+KLGL I+ED         +  A  D+PPLE    D + S+MEEVD
Sbjct:  519 YCVQQLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCKLMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVILLFETALLSSGFSLDDPQTHSNRIYRMIKLGLGIDEDEDVPVEEPSSAAAPEDIPPLE---GDDDASRMEEVD 725          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57
Identity = 120/208 (57.69%), Postives = 143/208 (68.75%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57
Identity = 120/208 (57.69%), Postives = 143/208 (68.75%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57
Identity = 120/208 (57.69%), Postives = 143/208 (68.75%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57
Identity = 120/208 (57.69%), Postives = 143/208 (68.75%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  528 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 732          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57
Identity = 120/208 (57.69%), Postives = 143/208 (68.75%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 1.124e-56
Identity = 119/208 (57.21%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 219.935 bits (559), Expect = 1.124e-56
Identity = 119/208 (57.21%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 219.55 bits (558), Expect = 1.468e-56
Identity = 119/208 (57.21%), Postives = 143/208 (68.75%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        +MPPLE    D + S+MEEVD
Sbjct:  524 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDTAAEEASPAVTEEMPPLE---GDDDTSRMEEVD 728          
The following BLAST results are available for this feature:
BLAST of GE213293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HSP82_TOBAC8.863e-7070.44Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HS90B_DANRE3.863e-5756.67Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HS90A_PIG3.863e-5757.69Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR3.863e-5757.69Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA3.863e-5757.69Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN3.863e-5757.69Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_BOVIN3.863e-5757.69Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_RAT1.124e-5657.21Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE1.124e-5657.21Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_CHICK1.468e-5657.21Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]

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Properties
Property NameValue
Genbank description147 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.