GE213293

Overview
NameGE213293
Unique NameGE213293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.270e-56
Identity = 118/208 (56.73%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERI+KAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  529 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 218.009 bits (554), Expect = 4.271e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 4.271e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 218.009 bits (554), Expect = 4.271e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 116/208 (55.77%), Postives = 142/208 (68.27%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 721
            Y V QLKEF+GK LVS TKEGL+L E E+EKK  E  K KFE LCK +K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  520 YCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 1.243e-55
Identity = 114/208 (54.81%), Postives = 144/208 (69.23%), Query Frame = -1
Query:  119 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-------AGDADADMPPLEDAADDAEGSKMEEVD 721
            Y V QLKE++GK LVS TKEGL+L E E+EKK ++ LK K+E LCK +KD+L               SPCC+VT  YGWTANMERIMK+QALRDNS  GYM++KK +EINP +PI+E LR++A+ADKNDK+VKD          L+SGF+LDDP T  NRI+RM+KLGL I++D       +  A+ DMP LE    D + S+MEEVD
Sbjct:  521 YCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDILDKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGIDDDDSVVEEISQPAEEDMPVLE---GDDDTSRMEEVD 725          
BLAST of GE213293 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.119e-55
Identity = 117/205 (57.07%), Postives = 140/205 (68.29%), Query Frame = -1
Query:  128 YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKAIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKME 721
            Y V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK +KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+ME
Sbjct:  518 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRME 719          
The following BLAST results are available for this feature:
BLAST of GE213293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
HS90A_CRIGR3.270e-5656.73Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HS90B_RAT4.271e-5655.77Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MOUSE4.271e-5655.77Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_BOVIN4.271e-5655.77Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90B_PONAB5.577e-5655.77Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA5.577e-5655.77Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN5.577e-5655.77Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE5.577e-5655.77Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
H90A1_DANRE1.243e-5554.81Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90A_HORSE2.119e-5557.07Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]

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Properties
Property NameValue
Genbank description147 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.