FC871692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 1.792e-55 Identity = 105/226 (46.46%), Postives = 149/226 (65.93%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674 E +++M + KN +D EYP T +L++ CVN++A L+N +++SE +G TVGSSEA ML G+A K +W++ G KP++V + QVCWEKF Y+++EL+EV +SE + ++ ++ VDE TI + ILG T G+F+D+ LNDL+ + N + IHVD ASG PF+ P LEWDFRLP V SIN SGHKYGLVY G+GW++WR+KE Sbjct: 67 EAEQIMAETMEKNAIDKSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQVCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIMTLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGLVYPGVGWILWRDKE 290
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.375e-47 Identity = 103/233 (44.21%), Postives = 141/233 (60.52%), Query Frame = 3 Query: 12 KLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTE-KNKETGW---DTPIHVDAASGGFIAPF--------LYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNK 671 KL+ + KN D DEYP EL RC++++A+L++A E +G T GSSEAIML GLA K++W+++ K GK KPNI+ + QV EKF RYFEVE + V +S ++++DP + VDENTI ILG+T G E+V+ + D+L++ + K W D PIH D ASGGFI PF Y W F P V S+N SGHK+GL G+GWV+WR++ Sbjct: 104 KLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHPRVVSMNTSGHKFGLTTPGLGWVLWRDE 334
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: SGPL_YEAST (Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae GN=DPL1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 62/217 (28.57%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 39 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL----YPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674 N + D +P ++++ V+++ R+FNAP S+T G T G +E+++LA L+ K + R +P I+ ++K A YF ++L+ V+L Y +D K + +++NTI + + +G +D++ L + + + P+HVD+ G FI F+ Y L DFR+P V SI+ HKYG G +++RN + Sbjct: 195 NQLHPDVFPAVRKMESEVVSMVLRMFNAP---SDTGCGTTTSGGTESLLLACLSAKMYALHHRG-----ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTILLVGSAPNFPHGIADDIEGLGKIAQK------YKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSD 397
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_UNCMA (L-tyrosine decarboxylase OS=Uncultured methanogenic archaeon RC-I GN=mfnA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 60/215 (27.91%), Postives = 109/215 (50.70%), Query Frame = 3 Query: 30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVG-VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNK 671 +N N D +P T ++++RC+ +I L + P A G + T G+ I A + K ++R+A NIV + +EK ++ + ++ L + DP++ ++D+NTI + A+ G+T G+ + ++ + L E D +HVDAA GGF+ PF+ ++DF +P V+SI + HK GL G +++R++ Sbjct: 48 VNTNLGDPKLFPGTADIEHRCIGLIGDLLHLP-----AATGYISTGGTESNIQALRTAIQMKHTDRRRA--------NIVVPESAHYSFEKASQMLGIAIRRAPLDD-LLRADPSEMAALIDKNTIALVAVAGTTEFGQIDPIEEIGRLAQEH------DLYLHVDAAFGGFVIPFMDRPAKFDFEIPGVQSITIDPHKMGLSTIPSGGLLYRSE 242
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METLZ (L-tyrosine decarboxylase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mfnA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18 Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 3 Query: 39 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674 N D +P TT++++R V+ + L + P G GT + +AI +A K K E K PNIV A+ ++K +E++ V + Y V D K EMVD+NTI V+AI G+T G +DV+ + + E D HVDAA GG + PFL +DF +P V SI++ HK G+ G ++ R E Sbjct: 51 NLGDPGLFPGTTKIEDRLVHSLGELMHHPGAGGYATSG-GTESNLQAIRIA---------KKLKPEIK---NPNIVVPASAHFSFDKTCDILGLEMRTVPYGKNYTV-DCDKMAEMVDKNTISVSAIAGTTEYGMIDDVERIAKIALEN------DLFFHVDAAFGGMVIPFLPNPAPFDFEVPGVSSISLDPHKMGMSTIPCGCLLLREPE 242
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METTP (L-tyrosine decarboxylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mfnA PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.937e-17 Identity = 60/215 (27.91%), Postives = 101/215 (46.98%), Query Frame = 3 Query: 30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674 + N D +P T E++ R V I+ L + G GT + +A+ A R + G+ NIV + ++K A +E+++ +L E V D ++D+ T+C+ I G+T G+ + + L++L E P+HVDAA GGF+ PFL + WDFR V+SI + HK G+ G +++R+ + Sbjct: 51 LETNLGDPGLFPGTAEIERRVVGILGSLLGCSDATGYVSTG-GTESNIQAVRAA-----------RNSSGRR--DGNIVVPRSAHFSFDKIADLLNLEVRKAELDESLRV-DVGDVERLIDDRTVCLVGIAGTTEFGQVDPIGDLSELAIENG------IPLHVDAAFGGFVLPFLEKDCMWDFRAEGVQSITIDPHKMGMSPIPAGGLIFRSSD 244
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METHJ (L-tyrosine decarboxylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=mfnA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16 Identity = 61/198 (30.81%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 39 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL 632 N D +P T L++R + A L++ P +A G T G +E+ + L F +K +N ++ PNI+ A+ +EK ++E++ V + E Y + A A E++D+NT C+ + G+T G + + L L ++ +HVDAA GG++ PFL +DF +P V SI V HK GL Sbjct: 51 NLGDPGLFPGTATLEDRLIRWFADLYHEP-----SAGGCTTSGGTESNIQV-LRFCKKTKNVKE--------PNIIVPASAHFSFEKACGMMDIEMRVVPVDEQYRMKTDA-AGELIDKNTCCIVGVAGTTEYGMTDPIPALGKLAEQEGVH------LHVDAAFGGYVLPFLDDAPPFDFSVPGVGSIAVDPHKMGL 227
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_ARCFU (L-tyrosine decarboxylase OS=Archaeoglobus fulgidus GN=mfnA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15 Identity = 61/214 (28.50%), Postives = 99/214 (46.26%), Query Frame = 3 Query: 30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNK 671 I N D + T EL+ + + +I + + ET G G +EA + G+ R Q K + PNIV +EK V++K + E Y V D + +++DENT+ + I G+T G+ + + L+ L E+ E +HVDAA GG + PF+ +DF+ V SI + HK G+ G +++RN+ Sbjct: 40 IETNLGDPGIFRGTVELEAKLMRLIGDILHC-----ETPAGYICSGGTEA-NIQGIRAARNVQKK--------ENPNIVIPKTAHFSFEKIGDILGVKIKRAGVDEEYKV-DVGQVEDLMDENTVAIVGIAGTTELGQIDPIVELSKLAEERQVE------LHVDAAFGGLVIPFMDNPYPFDFQNRGVSSITIDPHKMGMATIPAGGIIFRNE 232
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METAC (L-tyrosine decarboxylase OS=Methanosarcina acetivorans GN=mfnA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 63/221 (28.51%), Postives = 104/221 (47.06%), Query Frame = 3 Query: 30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLED-------SETAVGVGTVGSSEAIMLAGLAFKRK-WQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRN 668 I N D+ + + L+ V ++ L +AP D +A G T G +E+ + A K K++ +G P NIV + ++K A +E++ L + V D A ++D NTI + I G+T G+ + + L+++ E + +H+DAA GGF+ PFL +DF+LP V SI V HK GL G +++R+ Sbjct: 48 IEANLGDLGLFAGASRLEQEVVGMLGELLHAPSIDVPFGGSCESSACGYLTTGGTESNIQAVRGMKNLVTTGKKELKGAP----NIVIPESAHFSFDKVADMMGIEVRRASLDSEFRV-DMASIESLIDANTIGLIGIAGNTEFGQIDPIDKLSEIALEN------ELFLHIDAAFGGFVIPFLEKPQPFDFKLPGVTSIAVDPHKMGLSTIPSGALLFRS 257
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METKA (L-tyrosine decarboxylase OS=Methanopyrus kandleri GN=mfnA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 66/222 (29.73%), Postives = 101/222 (45.50%), Query Frame = 3 Query: 21 MAAINKNYVDMDEYPVTTELQNRCVNIIAR-LFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL---YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674 +A ++ N D +P + C+ +A L + P E A G G +EA +LA A + + I+ A +EK AR ++L E L Y V D +++ +T + I+G+T G +D++ L+D+ + P+HVDAA GGF APFL YP + F L V S+ V HK GLV G +V+R+ E Sbjct: 31 VAGLHVNLGDPYLFPNAYRAERECIGWLAETLLDHPAP--EEAEGSIVSGGTEANILAAYAAREVTGGRE-----------IIVPATRHFSFEKAARMLRMKLVEAPLRSDYTV-DVDAVQDLISRDTALIVGIVGTTETGSVDDIEALSDVAEDHG------VPLHVDAAFGGFTAPFLREEYPLPRFGFDLEAVVSVTVDPHKMGLVPPPAGGIVFRDDE 232 The following BLAST results are available for this feature:
BLAST of FC871692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871692 ID=FC871692; Name=FC871692; organism=Citrus sinensis; type=EST; length=678bpback to top |