FC871692

Overview
NameFC871692
Unique NameFC871692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: SGPL_DROME (Sphingosine-1-phosphate lyase OS=Drosophila melanogaster GN=Sply PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 53/216 (24.54%), Postives = 98/216 (45.37%), Query Frame = 3
Query:   39 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674
            N +  D +P   +++   V +   LF+     +  + G  T G +E+I++A  A++         E K   +PNIV    V   ++K  +YF + ++ V +    Y +D  K    ++ NTI +     +   G  +D++ +  L  +      +D P+HVDA  G F+   +    Y    +DF +  V SI+   HKYG    G   +++ +K+
Sbjct:  159 NPLHADLFPGVCKMEAEVVRMACNLFHG----NSASCGTMTTGGTESIVMAMKAYR-----DFAREYKGITRPNIVVPKTVHAAFDKGGQYFNIHVRSVDVDPETYEVDIKKFKRAINRNTILLVGSAPNFPYGTIDDIEAIAALGVK------YDIPVHVDACLGSFVVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGSSVILYSDKK 359          
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METS3 (L-tyrosine decarboxylase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mfnA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13
Identity = 65/219 (29.68%), Postives = 100/219 (45.66%), Query Frame = 3
Query:   30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674
            ++ N  D   +  T  ++N  +  I  L    L  SE    + T G+   IM    A +    + RK +G    +  I+   +    ++K A    +++ E KL E Y + D     E + +NT+ + AI G+T  G  + ++ L+++  E N         HVDAA GGF  PFL    Y    +DF LP V SI V  HK GL     G +++R KE
Sbjct:   50 LDSNLGDPGLFKGTKYIENEVIKSIGEL----LSISEPYGNIVTGGTEANIM----AMRAARNHARKYKG--IKEGEIIIPDSAHFSFKKAADMMNLKIIEAKLDENYKI-DVDSVKENISDNTVAIVAIAGTTELGLVDPIEELSEIAYENN------IYFHVDAAFGGFSIPFLRKIGYEFPPFDFSLPGVCSITVDPHKMGLAPIPAGGILFRKKE 251          
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_PYRFU (L-tyrosine decarboxylase OS=Pyrococcus furiosus GN=mfnA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 59/219 (26.94%), Postives = 101/219 (46.12%), Query Frame = 3
Query:   30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674
            +++N  D   +P T +++   + +++ L +      E   G    G +EA +LA  AF+              + P ++   +    + K      V+L    L+  Y V D       + ENTI +  I G+T  G  +D+  L+DL  +      +  P+HVDAA GGF+ PF     Y   ++DF+L  V+SI +  HK G+     G +V+R+K+
Sbjct:   52 MDRNLGDPGLHPGTKKIEEEVIEMLSDLLHL-----ERGYGHIVSGGTEANILAVRAFRNL---------ADVENPELILPKSAHFSFIKAGEMLGVKLIWADLNPDYTV-DVKDVEAKISENTIGIVGIAGTTGLGVVDDIPALSDLARD------YGIPLHVDAAFGGFVIPFAKELGYDLPDFDFKLKGVQSITIDPHKMGMAPIPAGGIVFRHKK 249          
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METPE (L-tyrosine decarboxylase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=mfnA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12
Identity = 60/207 (28.99%), Postives = 92/207 (44.44%), Query Frame = 3
Query:   12 KLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL 632
            K  +  +  N  D   +P T  L+   +  +  LF+   E    A   GT  + +A+ +A            KA+ K  DKPN+V        ++K      +++K V         D ++  + +D+NTI +  I GST  G  +D+  L  +  E+      D  +HVDAA GG + PFL     +DF LP V SI V  HK G+
Sbjct:   42 KAHLMFMETNLGDPGLFPGTASLERLLIERLGDLFHHR-EAGGYATSGGTESNIQALRIA------------KAQ-KKVDKPNVVIPETSHFSFKKACDILGIQMKTVPADRSMRT-DISEVSDAIDKNTIALVGIAGSTEYGMVDDIGALATIAEEE------DLYLHVDAAFGGLVIPFLPNPPAFDFALPGVSSIAVDPHKMGM 227          
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: SGPL_CAEEL (Sphingosine-1-phosphate lyase OS=Caenorhabditis elegans GN=spl-1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 57/216 (26.39%), Postives = 103/216 (47.69%), Query Frame = 3
Query:   39 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674
            N +  D +P   +++   + ++  L+N P EDS  +V   T G +E+I++A  +++ +      A     + P I+        ++K A    + L+ V +     V    K +E + ++ +C+  ++GS  N     +  + ++     K   +  P+HVDA  GGF+ PF+    Y    +DFR P V SI+   HKYG    G   V++R+KE
Sbjct:  166 NPLHPDVFPGARKMEAELIRMVLNLYNGP-EDSSGSV---TSGGTESIIMACFSYRNR------AHSLGIEHPVILACKTAHAAFDKAAHLCGMRLRHVPVDSDNRV--DLKEMERLIDSNVCM--LVGSAPNFPSGTIDPIPEIAKLGKK---YGIPVHVDACLGGFMIPFMNDAGYLIPVFDFRNPGVTSISCDTHKYGCTPKGSSIVMYRSKE 364          
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: MFNA_METBU (L-tyrosine decarboxylase OS=Methanococcoides burtonii (strain DSM 6242) GN=mfnA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 56/215 (26.05%), Postives = 100/215 (46.51%), Query Frame = 3
Query:   30 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674
            I  N  D   +P T  L+ + + +  ++ +   ++S    G  T G +E+ + A     R   N R        +PNIV   +    ++K A    +E+++  L +   V D      ++D+NTI +  I G+T  G+ + +  L+ +  EK         +H+DAA GGF+ PF+  +  +DFRL  V S+ +  HK  L     G ++++  E
Sbjct:   48 IESNMGDPGLFPGTFNLEKQVLAMFGKMLHH--KNSPEKAGYLTTGGTESNIQA----IRSMHNFRH----DISRPNIVMPESAHFSFDKVANLSGIEIRKASLDKLLKV-DLDSVRSLIDKNTIGLVGIAGTTEFGQLDPINELSKIAIEKG------IFLHIDAAFGGFVIPFMDIDYTYDFRLEGVTSMTIDPHKMALSTIPSGGLLFKEPE 245          
BLAST of FC871692 vs. ExPASy Swiss-Prot
Match: SGPL_ORYSJ (Sphingosine-1-phosphate lyase OS=Oryza sativa subsp. japonica GN=SPL PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 59/230 (25.65%), Postives = 104/230 (45.22%), Query Frame = 3
Query:   24 AAINKNY--------VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAV-GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKE 674
            A INK Y        +  D +    +L+   V + A L     + S   + G  T G +E+I+LA    +   + K     K   KP ++   +    ++K A+YF ++++ V +++ + + D       ++ NTI +        +G  + ++ L +L +       +D  +HVD   GGF+ PF     YP   +DF +  V SI+   HKYGL   G   V+++N E
Sbjct:  144 ALINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRTK-----KGITKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNKEF-LADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASR------YDICLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHE 361          
The following BLAST results are available for this feature:
BLAST of FC871692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
SGPL_DROME2.216e-1324.54Sphingosine-1-phosphate lyase OS=Drosophila melano... [more]
MFNA_METS32.895e-1329.68L-tyrosine decarboxylase OS=Methanobrevibacter smi... [more]
MFNA_PYRFU4.938e-1326.94L-tyrosine decarboxylase OS=Pyrococcus furiosus GN... [more]
MFNA_METPE1.437e-1228.99L-tyrosine decarboxylase OS=Methanosphaerula palus... [more]
SGPL_CAEEL7.130e-1226.39Sphingosine-1-phosphate lyase OS=Caenorhabditis el... [more]
MFNA_METBU7.130e-1226.05L-tyrosine decarboxylase OS=Methanococcoides burto... [more]
SGPL_ORYSJ1.588e-1125.65Sphingosine-1-phosphate lyase OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1CB12FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871692 ID=FC871692; Name=FC871692; organism=Citrus sinensis; type=EST; length=678bp
CTGAATGTGACAAGCTTATGATGGCTGCCATTAACAAGAACTACGTTGAC
ATGGATGAGTATCCTGTCACCACCGAGCTTCAGAATCGATGTGTGAACAT
TATAGCCCGACTGTTCAATGCTCCACTGGAGGACTCCGAGACGGCTGTCG
GAGTTGGAACCGTAGGATCATCGGAAGCCATAATGTTGGCCGGCCTTGCA
TTCAAAAGAAAGTGGCAGAACAAGCGCAAGGCTGAAGGAAAGCCCTTTGA
CAAACCCAACATTGTCACTGGAGCGAACGTTCAGGTCTGCTGGGAGAAAT
TTGCAAGGTATTTTGAGGTGGAGTTGAAGGAAGTGAAGCTGTCGGAAGGC
TACTACGTGATGGACCCAGCCAAAGCTGTAGAAATGGTGGATGAAAACAC
TATCTGTGTTGCTGCTATTCTGGGTTCTACTCTCAATGGAGAATTTGAAG
ATGTCAAGCTCTTGAACGACCTTTTGACAGAGAAGAACAAGGAAACAGGA
TGGGATACTCCAATTCATGTTGATGCTGCTAGTGGTGGCTTCATTGCACC
ATTTTTGTACCCAGAGCTTGAATGGGACTTCCGCTTGCCGCTGGTGAAGA
GTATTAATGTTAGTGGCCACAAGTACGGGCTTGTGTATGCTGGTATTGGT
TGGGTTGTTTGGAGAAACAAAGAAGACT
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