FC871635

Overview
NameFC871635
Unique NameFC871635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            +N   A+W RN  +++E+EY +FY  +  DF  E PL WSH   EG  E+ ++L++P KAP DLY+
Sbjct:  231 VNKASALWARNKSDISEQEYQEFYKHVSHDF--ENPLTWSHNRVEGKQEYISLLYIPSKAPFDLYD 294          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_HAEPS (Chaperone protein htpG OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            +N  +A+W R+  E+++EEY +FY  +  DF+D  PL WSH   EG  E+ ++L+VP KAP DL++
Sbjct:  230 INKAQALWTRSKNEISDEEYKEFYKHISHDFAD--PLIWSHNKVEGKQEYTSLLYVPSKAPWDLFQ 293          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPF (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf0-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            +N   A+W R   EV +EEY +FY  +  DF  E PL+WSH   EG +E+ ++L+VP +AP DLY+
Sbjct:  233 VNRASALWTRPRTEVKDEEYQEFYKHIAHDF--ENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQ 296          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W R   E++EEEY +FY  L  DF+D  PL W+H   EG+ E+ ++L+VP KAP DL+
Sbjct:  230 INKAQALWTRAKNEISEEEYQEFYKHLSHDFTD--PLLWAHNKVEGNQEYTSLLYVPAKAPWDLF 292          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            +N   A+W     ++ EEEY  FY  +  DF D  PLAW+H   EG +E+ ++LF+PP+AP DL+E
Sbjct:  233 INKATALWTLPKNDIKEEEYQAFYKHVAHDFED--PLAWTHNRVEGKLEYTSLLFIPPRAPFDLWE 296          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_DECAR (Chaperone protein htpG OS=Dechloromonas aromatica (strain RCB) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            +N   A+W+R+  ++TEE+Y +FY  +  DF D  PLAW+H   EG  E+  +L++P +AP DL++
Sbjct:  236 VNQANALWVRSKSDITEEQYKEFYKHVAHDFED--PLAWTHARVEGKQEYTQLLYIPARAPFDLWD 299          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N   A+W R  K++T+E+Y  FY S+  DF  E PL WSH   EG+ E+  +L++P KAP DL+
Sbjct:  235 VNKASALWTRPKKDITDEQYQDFYKSISHDF--ENPLTWSHNRVEGNTEYTQLLYIPAKAPFDLW 297          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            L+N   A+W RN  +V++EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P KAP D++
Sbjct:  237 LMNKATALWTRNKSDVSDEEYQEFYKYISHDFTD--PLLWSHNRVEGKQEYTSLLYIPAKAPWDMW 300          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 2
Query:    8 LIGQFGVGFYSVYLVADYVEVIS-KHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 202
            LIGQFGVGFYS ++VAD V V S K  +DK YVWES+ +G + +S    +    RGTEI LH++ E
Sbjct:  118 LIGQFGVGFYSSFMVADKVTVTSRKAGEDKVYVWESEGEGEYIVSSS--DREFSRGTEIALHIKKE 181          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 2
Query:    8 LIGQFGVGFYSVYLVADYVEVIS-KHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 202
            LIGQFGVGFYS ++VAD V V S K  +DK YVWES+ +G + +S    +    RGTEI LH++ E
Sbjct:  118 LIGQFGVGFYSSFMVADKVTVTSRKAGEDKVYVWESEGEGEYIVSNS--DREFSRGTEIALHIKKE 181          
The following BLAST results are available for this feature:
BLAST of FC871635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
HTPG_METFK3.760e-1143.94Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_HAEPS3.760e-1143.94Chaperone protein htpG OS=Haemophilus parasuis ser... [more]
HTPG_PSEPF4.910e-1145.45Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_PASMU4.910e-1146.15Chaperone protein htpG OS=Pasteurella multocida GN... [more]
HTPG_NITOC4.910e-1143.94Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_DECAR4.910e-1140.91Chaperone protein htpG OS=Dechloromonas aromatica ... [more]
HTPG_ACISJ4.910e-1144.62Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_SHEHH6.413e-1143.94Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_RICBR6.413e-1153.03Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB86.413e-1153.03Chaperone protein htpG OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871635 ID=FC871635; Name=FC871635; organism=Citrus sinensis; type=EST; length=697bp
CCTCAATCTTATCGGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTG
TTGCTGACTATGTTGAAGTCATTAGCAAACATAATGATGACAAACAGTAT
GTATGGGAATCAAAGGCTGATGGAGCATTTGCAATTTCTGAGGACACATG
GAATGAGCCACTAGGACGCGGAACCGAGATTAAATTGCACCTCAGAGATG
AAGCTGGGGAGTACTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAA
TATTCTGAATTTATCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGT
TGATGTGGATGTTCCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGA
AAGCCGAAAAAGAAGAAGAAACGGAAAAAAGTGAAAGTGAAAGTGAAAGT
GAAGATGAAGATGAAGATGAAGATTCTGAGAAAAAGCCAAAGACCAAGAC
AGTGAAGGAAACTACTTATGAGTGGGAGCTCTTGAACGATGTAAAGGCTA
TATGGCTGCGGAATCCAAAGGAAGTGACAGAGGAAGAGTACGCCAAATTC
TATCACTCTTTAGTAAAGGATTTTAGTGATGAGAAGCCCTTAGCATGGAG
TCACTTCAATGCTGAAGGCGATGTTGAGTTTAAGGCTGTTTTGTTTGTGC
CTCCAAAGGCTCCTCATGATCTTTATGAGAGTTATTATAACACCAAT
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