FC871635

Overview
NameFC871635
Unique NameFC871635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            +N   A+W R   E+ +EEY +FY  +  DF  E PL+WSH   EG +E+ ++L+VP +AP DLY+
Sbjct:  233 VNRASALWTRPRTEIKDEEYQEFYKHIAHDF--ENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQ 296          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF++  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFNE--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF++  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFNE--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA6 (Chaperone protein htpG OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N   A+W R+  EV++EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P KAP D++
Sbjct:  239 VNKATALWTRDKSEVSDEEYKEFYKHISHDFAD--PLVWSHNKVEGKTEYNSLLYIPAKAPFDMW 301          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_HAES2 (Chaperone protein htpG OS=Haemophilus somnus (strain 2336) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W R+  E+++EEY +FY  L  DF+D  PL W+H   EG+ E+ ++L+VP KAP DL+
Sbjct:  230 INKAQALWTRSKGEISDEEYKEFYKHLSHDFAD--PLLWTHNKVEGNQEYTSLLYVPSKAPWDLF 292          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_HAES1 (Chaperone protein htpG OS=Haemophilus somnus (strain 129Pt) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W R+  E+++EEY +FY  L  DF+D  PL W+H   EG+ E+ ++L+VP KAP DL+
Sbjct:  230 INKAQALWTRSKGEISDEEYKEFYKHLSHDFAD--PLLWTHNKVEGNQEYTSLLYVPSKAPWDLF 292          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAP 664
            LN  KA+WL++P EVT+EEY +FY  L  D+++  PL   H+ AEG +EF A+L+VP K P
Sbjct:  221 LNSQKALWLKSPSEVTKEEYKEFYQHLTHDWNE--PLRTVHYRAEGTMEFNALLYVPGKKP 279          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ALCBS (Chaperone protein htpG OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYN 691
            LN   A+W R   EVT+EEY  FY  +  DF D   L WSH   EG +E+ ++L+VP +AP DLY+   N
Sbjct:  226 LNSATALWQRPRSEVTDEEYQSFYKHISHDFQDA--LTWSHNKVEGKLEYTSLLYVPAQAPFDLYQREAN 293          
The following BLAST results are available for this feature:
BLAST of FC871635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
HTPG_PSEF56.413e-1143.94Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_ECOUT6.413e-1141.54Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOK16.413e-1141.54Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_PSEA68.376e-1143.08Chaperone protein htpG OS=Pseudoalteromonas atlant... [more]
HTPG_HAES28.376e-1144.62Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_HAES18.376e-1144.62Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_BDEBA8.376e-1150.82Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HTPG_ALCBS8.376e-1145.71Chaperone protein htpG OS=Alcanivorax borkumensis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871635 ID=FC871635; Name=FC871635; organism=Citrus sinensis; type=EST; length=697bp
CCTCAATCTTATCGGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTG
TTGCTGACTATGTTGAAGTCATTAGCAAACATAATGATGACAAACAGTAT
GTATGGGAATCAAAGGCTGATGGAGCATTTGCAATTTCTGAGGACACATG
GAATGAGCCACTAGGACGCGGAACCGAGATTAAATTGCACCTCAGAGATG
AAGCTGGGGAGTACTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAA
TATTCTGAATTTATCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGT
TGATGTGGATGTTCCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGA
AAGCCGAAAAAGAAGAAGAAACGGAAAAAAGTGAAAGTGAAAGTGAAAGT
GAAGATGAAGATGAAGATGAAGATTCTGAGAAAAAGCCAAAGACCAAGAC
AGTGAAGGAAACTACTTATGAGTGGGAGCTCTTGAACGATGTAAAGGCTA
TATGGCTGCGGAATCCAAAGGAAGTGACAGAGGAAGAGTACGCCAAATTC
TATCACTCTTTAGTAAAGGATTTTAGTGATGAGAAGCCCTTAGCATGGAG
TCACTTCAATGCTGAAGGCGATGTTGAGTTTAAGGCTGTTTTGTTTGTGC
CTCCAAAGGCTCCTCATGATCTTTATGAGAGTTATTATAACACCAAT
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