FC871635

Overview
NameFC871635
Unique NameFC871635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            LN  K IW RNP +++ EEYA+FY SL  D+ D   LA  HF+ EG +EF+A+LF P +AP DL+E+  + N
Sbjct:  265 LNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDH--LAVKHFSVEGQLEFRALLFAPQRAPFDLFENKKSKN 334          

HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 2
Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEP-LGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPI 277
            +++IGQFGVGFYS +LVAD V V SK+NDD  Y WES A G+F +    +N+P L RGT+I ++++++                   FI +PI
Sbjct:  116 ISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVR--PYNDPELTRGTKITMYIKEDQVDFLEERKIKEIVKKHSQFIGYPI 206          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 2
Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 202
            +++IGQFGVGFYS YLVAD V V SK+N D+ YVWES A G F I+  T    + RGT I LHL+++
Sbjct:  113 MSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSACGTFTIT-STPESDMKRGTRITLHLKED 178          

HSP 2 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 2
Query:  485 NDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            N  K +W R+PK+VT+EEYA FY ++  D+ D  P A  HF+ EG +EF++++FVP +AP D++E
Sbjct:  262 NKHKPLWTRDPKDVTKEEYAAFYKAISNDWED--PRATKHFSVEGQLEFRSIMFVPKRAPFDMFE 324          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 2
Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 202
            +++IGQFGVGFYS YLVAD V V+SK+N+D  Y WES A G F ++  T +  L RGT I LHL+++
Sbjct:  113 MSMIGQFGVGFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVT-STPDCDLKRGTRIVLHLKED 178          

HSP 2 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 2
Query:  485 NDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            N  K +W R+PK+VT+EEYA FY ++  D+  E+ L+  HF+ EG +EF+A+LF+P +AP D++E
Sbjct:  266 NKHKPLWTRDPKDVTKEEYASFYKAISNDW--EEQLSTKHFSVEGQLEFRAILFLPKRAPFDMFE 328          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 2
Query:  485 NDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            N  K +W R+PK+VT+EEYA FY ++  D+ D  P+A  HF+ EG +EF++++FVP +AP D++E
Sbjct:   15 NKHKPLWTRDPKDVTKEEYAAFYKAISNDWED--PMATKHFSVEGQLEFRSIMFVPKRAPFDMFE 77          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  485 NDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYE 679
            N  K +W R+PK+VT+EEYA FY ++  D+ D  P A  HF+ EG +EF+A++FVP +AP D+ E
Sbjct:  263 NKHKPLWTRDPKDVTKEEYAAFYKAISNDWED--PPATKHFSVEGQLEFRAIMFVPKRAPFDMLE 325          

HSP 2 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2
Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 202
            +++IGQFGVGFYS YLVAD V V SK+N D+ YVWES A G F I+    ++ +     I LHL+++
Sbjct:  113 MSMIGQFGVGFYSAYLVADRVTVTSKNNSDEVYVWESSAGGTFTITSAPESD-MKLPARITLHLKED 178          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            LN +KAIW R+  EVTEEEY +FY  +  DF  EKPL   H++AEG  EFKA+L++P   P DL+
Sbjct:  240 LNSMKAIWTRSKSEVTEEEYEEFYKHVSHDF--EKPLKTIHYSAEGTSEFKALLYLPAHKPFDLF 302          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N   A+W RNPKE+ +EEY +FY  +  DF D  PL W H   EG  E+ ++L+VP +AP DLY
Sbjct:  238 VNRATALWTRNPKEIKDEEYQEFYKHVAHDFED--PLLWGHNRVEGAQEYTSLLYVPARAPFDLY 300          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N   A+W RNPKE+ +EEY +FY  +  DF D  PL W H   EG  E+ ++L+VP +AP DLY
Sbjct:  242 VNRATALWTRNPKEIKDEEYQEFYKHVAHDFED--PLLWGHNRVEGAQEYTSLLYVPARAPFDLY 304          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 2
Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 202
            +++IGQFGVGFYS YLVA+ V  I+KHND++QY W S A  +F +  D   EP+ R T++ LHL+++
Sbjct:   99 ISMIGQFGVGFYSAYLVAEKV-AITKHNDEEQYSWVSSAGSSFTLHVD-HGEPIDRDTKVILHLKED 163          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            LN +KAIW R   EVTEEEY +FY  +  DF  EKPL   H++AEG  EFKA+L++P   P DL+
Sbjct:  240 LNSMKAIWARAKSEVTEEEYEEFYKHVSHDF--EKPLKTIHYSAEGVSEFKALLYLPAHKPFDLF 302          
The following BLAST results are available for this feature:
BLAST of FC871635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
HSP90_CAEBR8.094e-1450.00Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP83_LEIIN8.094e-1456.72Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_TRYBB1.381e-1355.22Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP83_LEIDO5.246e-1347.69Heat shock protein 83 (Fragment) OS=Leishmania don... [more]
HSP83_LEIAM2.604e-1249.23Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HTPG_GEOSL3.401e-1253.85Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_AERS45.801e-1247.69Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_AERHH5.801e-1247.69Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
H90B4_HUMAN7.576e-1250.75Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]
HTPG_GEOMG1.292e-1153.85Chaperone protein htpG OS=Geobacter metallireducen... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871635 ID=FC871635; Name=FC871635; organism=Citrus sinensis; type=EST; length=697bp
CCTCAATCTTATCGGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTG
TTGCTGACTATGTTGAAGTCATTAGCAAACATAATGATGACAAACAGTAT
GTATGGGAATCAAAGGCTGATGGAGCATTTGCAATTTCTGAGGACACATG
GAATGAGCCACTAGGACGCGGAACCGAGATTAAATTGCACCTCAGAGATG
AAGCTGGGGAGTACTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAA
TATTCTGAATTTATCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGT
TGATGTGGATGTTCCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGA
AAGCCGAAAAAGAAGAAGAAACGGAAAAAAGTGAAAGTGAAAGTGAAAGT
GAAGATGAAGATGAAGATGAAGATTCTGAGAAAAAGCCAAAGACCAAGAC
AGTGAAGGAAACTACTTATGAGTGGGAGCTCTTGAACGATGTAAAGGCTA
TATGGCTGCGGAATCCAAAGGAAGTGACAGAGGAAGAGTACGCCAAATTC
TATCACTCTTTAGTAAAGGATTTTAGTGATGAGAAGCCCTTAGCATGGAG
TCACTTCAATGCTGAAGGCGATGTTGAGTTTAAGGCTGTTTTGTTTGTGC
CTCCAAAGGCTCCTCATGATCTTTATGAGAGTTATTATAACACCAAT
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