FC871635

Overview
NameFC871635
Unique NameFC871635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_ECO24 (Chaperone protein htpG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMW 289          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLY 676
            +N   A+W RN  +VT+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P KAP DL+
Sbjct:  238 MNKATALWTRNKSDVTDEEYQEFYKHISHDFAD--PLLWSHNRVEGKQEYTSLLYIPSKAPWDLW 300          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_PHOPR (Chaperone protein htpG OS=Photobacterium profundum GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 2
Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDL 673
            +N  +A+W RN  E+TEEEY +FY+ +  DF++  PL WSH   EG  ++ ++L+VP KAP D+
Sbjct:  235 INKAQALWTRNKSEITEEEYKEFYNHVSHDFAE--PLTWSHNRVEGTQDYTSLLYVPSKAPWDM 296          
BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 29/65 (44.62%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDL 673
            ++N   A+W R+  E+T+E+Y +FY  L  D+  E PLAW+HF A+G+ +F  +LFVP + P DL
Sbjct:  235 VVNKASALWQRSKSEITDEQYQEFYKHLTHDW--EAPLAWTHFKADGNTQFTGLLFVPKQPPFDL 297          
The following BLAST results are available for this feature:
BLAST of FC871635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
HTPG_ECOLI2.204e-1143.08Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC2.204e-1143.08Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL62.204e-1143.08Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL52.204e-1143.08Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOHS2.204e-1143.08Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]
HTPG_ECO572.204e-1143.08Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_ECO242.204e-1143.08Chaperone protein htpG OS=Escherichia coli O139:H2... [more]
HTPG_SHELP2.879e-1146.15Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_PHOPR3.760e-1145.31Chaperone protein htpG OS=Photobacterium profundum... [more]
HTPG_MYXXD3.760e-1144.62Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3AD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871635 ID=FC871635; Name=FC871635; organism=Citrus sinensis; type=EST; length=697bp
CCTCAATCTTATCGGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTG
TTGCTGACTATGTTGAAGTCATTAGCAAACATAATGATGACAAACAGTAT
GTATGGGAATCAAAGGCTGATGGAGCATTTGCAATTTCTGAGGACACATG
GAATGAGCCACTAGGACGCGGAACCGAGATTAAATTGCACCTCAGAGATG
AAGCTGGGGAGTACTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAA
TATTCTGAATTTATCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGT
TGATGTGGATGTTCCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGA
AAGCCGAAAAAGAAGAAGAAACGGAAAAAAGTGAAAGTGAAAGTGAAAGT
GAAGATGAAGATGAAGATGAAGATTCTGAGAAAAAGCCAAAGACCAAGAC
AGTGAAGGAAACTACTTATGAGTGGGAGCTCTTGAACGATGTAAAGGCTA
TATGGCTGCGGAATCCAAAGGAAGTGACAGAGGAAGAGTACGCCAAATTC
TATCACTCTTTAGTAAAGGATTTTAGTGATGAGAAGCCCTTAGCATGGAG
TCACTTCAATGCTGAAGGCGATGTTGAGTTTAAGGCTGTTTTGTTTGTGC
CTCCAAAGGCTCCTCATGATCTTTATGAGAGTTATTATAACACCAAT
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