FC871617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38 Identity = 100/269 (37.17%), Postives = 150/269 (55.76%), Query Frame = 3 Query: 3 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN-YRVEENDGALYLGWRNRAMATSSAWK 806 E E +HIID I QG QW L H LA RPGG P VR+TG+ S L+ GKRLS+FA + +PFEF A A ++ + L V EAV V+ ++ H + D + S N L L++ L+PKVVT+VEQ+ +++ F RF+E + YY+A+F+S+D + D +R EQ ++R+I N++A G R + G WR + +GF L+ +L + S+ Y + E +GAL LGW++ + T+SAW+ Sbjct: 399 EREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASME------ALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVH--WLRHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQD-LSHSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 653
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38 Identity = 103/272 (37.87%), Postives = 154/272 (56.62%), Query Frame = 3 Query: 3 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRD---VLKDYDSN-YRVEENDGALYLGWRNRAMATSSAWK 806 E E +HIID I QG QW L H LA RPGG P VR+TG+ S L+ GKRLS+FA + +PFEF A A ++ + L V EAV V+ ++ H + D + S N L L++ L+PKVVT+VEQ+ +++ F RF+E + YY+A+F+S+D + D +R EQ ++R+I N++A G R + G WR + +GF R+S L +A +L + S+ Y + E +GAL LGW++ + T+SAW+ Sbjct: 390 EREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASME------ALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVH--WLRHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQD-LSHSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGF---RVSSLAGSAAAQAVLLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 644
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38 Identity = 100/269 (37.17%), Postives = 150/269 (55.76%), Query Frame = 3 Query: 3 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN-YRVEENDGALYLGWRNRAMATSSAWK 806 E E +HIID I QG QW L H LA RPGG P VR+TG+ S L+ GKRLS+FA + +PFEF A A ++ + L V EAV V+ ++ H + D + S N L L++ L+PKVVT+VEQ+ +++ F RF+E + YY+A+F+S+D + D +R EQ ++R+I N++A G R + G WR + +GF L+ +L + S+ Y + E +GAL LGW++ + T+SAW+ Sbjct: 398 EREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASME------ALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVH--WLRHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQD-LSHSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 652
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38 Identity = 96/288 (33.33%), Postives = 148/288 (51.39%), Query Frame = 3 Query: 18 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRV-------QPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISA---------------EQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 806 +H++DF I QG QW LL ALA RPGG P R+TG+ Q L VG +L++FA + V F+++ A T ++E L+ + E + VN F +H + ++ +++L V+++ P++VT+VEQE+ N+ F RF E+L YY+ MF+S++ +S+ + + R I N++ACEG ER ERHE LG+WR+R AGF L +L + Y+VEE +G L LGW R + +SAW+ Sbjct: 338 VHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDET--DALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRL----LAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWR 619
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.031e-37 Identity = 96/288 (33.33%), Postives = 149/288 (51.74%), Query Frame = 3 Query: 18 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRV-------QPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESID---------------VTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 806 +H++DF I QG QW LL ALA RPGG P R+TG+ Q L VG +L++FA + V F+++ A T ++E L+ + E + VN F +H + ++ +++L V+++ P++VT+VEQE+ N+ F RF E+L YY+ MF+S++ ++ +E + + R I N++ACEG ER ERHE LG+WR+R AGF L +L + Y+VEE +G L LGW R + +SAW+ Sbjct: 334 VHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDET--DALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRL----LAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVY-LGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWR 614
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.119e-37 Identity = 97/269 (36.06%), Postives = 145/269 (53.90%), Query Frame = 3 Query: 3 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS-NYRVEENDGALYLGWRNRAMATSSAWK 806 E E +HIID I QG QW L H LA RPGG P VR+TG+ S T L+ GKRLS+FA +PFEF A ++ + L V EAV V+ ++ H + D + S N L L++ L+PKVVT+VEQ+ +N F RF+E + YY+A+F+S+ + + ++R EQ ++R+I N++A G R + WR + GF L+ +L + S Y + E++G L LGW++ + T+SAW+ Sbjct: 552 EREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMET------LEATGKRLSDFANKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAVH--WLQHSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQD-LSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIK-FHNWREKLQQCGFRGVSLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWR 806
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.173e-35 Identity = 92/268 (34.33%), Postives = 143/268 (53.36%), Query Frame = 3 Query: 3 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN-YRVEENDGALYLGWRNRAMATSSAW 803 E E +HIID I QG QW L H LA RPGG P VR+TG+ S L GKRLS+FA +PFEF A ++ + L V+ EAV V++ L H + ++ H L L++ L+PKVVT+VEQ+ ++ F RF+E + YY+A+F+S+ + + ++R EQ ++++I N++A G R WR + GF L+ +L + S+ Y + +++G L LGW++ ++ T+SAW Sbjct: 396 EKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSME------ALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHW---LQHSLYDVTGSDAH---TLWLLQRLAPKVVTVVEQD-LSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAW 649
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.173e-35 Identity = 84/268 (31.34%), Postives = 139/268 (51.87%), Query Frame = 3 Query: 6 NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSP-LVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 806 N +H+IDF I G QW L+H + GSP VRITGI+ Q ++ G+RL+ +A VPFE++ A ++ + L + E VVN + ++ DESV E+ RD +L L+ ++P + N F RF E L +++++F+ ++ PR+D++R+ E R+ +N+IACEG ERVER E +W R M +G P ++ ++ V Y ++ +++++ L GW+ R + S WK Sbjct: 448 NSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWK 713
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCL7_ARATH (Scarecrow-like protein 7 OS=Arabidopsis thaliana GN=SLC7 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32 Identity = 94/274 (34.31%), Postives = 136/274 (49.64%), Query Frame = 3 Query: 18 IHIIDFQIAQGTQWMFLLHALAKRPGGSPL-VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIE-----RVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYR-----VEENDGALYLGWRNRAMATSSAWK 806 IHI+DF I QG QW LL ALA R G P +RI+GI + G L G RL +FAA ++ FEF + RV P E +VVNF L+ + DE+ +T LRL +SL+P++VTL E E N F +R +L +Y+A+FES++ RD K+R+ E+ R I++++ + R E +WR AGF P + S + + +L +Y NY VE G + L W N + T S+W+ Sbjct: 274 IHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVG---TALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNY--NYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
BLAST of FC871617 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.105e-31 Identity = 97/276 (35.14%), Postives = 135/276 (48.91%), Query Frame = 3 Query: 3 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPL-VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACE--GIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYR-----VEENDGALYLGWRNRAMATSSAWK 806 E + IHI+DF I QG QW LL ALA R G P +R++GI + L G RL +FA ++ F+F + RV P E + VNF L+ + DE T D LRL KSL+P+VVTL E E N F +R L +Y+A+FES++ RD ++R+ E+ R I +I E GI R ER E +WR AGF +LS + + +L +Y NY VE G + L W + + T S+W+ Sbjct: 315 EKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE---TPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNY--NYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584 The following BLAST results are available for this feature:
BLAST of FC871617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871617 ID=FC871617; Name=FC871617; organism=Citrus sinensis; type=EST; length=810bpback to top |