FC871616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_SCHPO (60S ribosomal protein L14 OS=Schizosaccharomyces pombe GN=rpl14 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.319e-12 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 7 TERHAVIVHVLDQNRALVDAPDME--RGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 T + AVIV ++D RAL+D+P E R + + + LT I + +PR + + + DV NKW SS+W +KL K R+ LNDFDR +M K ++ V +AK K Sbjct: 22 TGKLAVIVDIVDHKRALIDSPCSEFPRQVIRYGSVVLTHIVMKLPRGARSGIVAKKWKAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVMRLKKQRREQVNVAVAKALK 133
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_DROME (60S ribosomal protein L14 OS=Drosophila melanogaster GN=RpL14 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.810e-12 Identity = 43/114 (37.72%), Postives = 58/114 (50.88%), Query Frame = 1 Query: 13 RHAVIVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKKENAA 348 R IV V+DQNR LVD P + R + L LT +I P + + A ++D+K +W+ S W K KR+SLNDFDR KL AK ++ L+ LKK A Sbjct: 23 RLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKA 136
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14B_YEAST (60S ribosomal protein L14-B OS=Saccharomyces cerevisiae GN=RPL14B PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.503e-11 Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 19 AVIVHVLDQNRALVDAPD--MERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAK 327 A IV ++DQ + L+D P + R +N ++ LT + +PR + T+ A V KW +SSW +K+ ++RA+L DF+R ++M+ + +K V++ LAK Sbjct: 33 AAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14A_YEAST (60S ribosomal protein L14-A OS=Saccharomyces cerevisiae GN=RPL14A PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11 Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 19 AVIVHVLDQNRALVDAPD--MERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAK 327 A IV ++DQ + L+D P + R +N ++ LT + +PR + T+ A V KW +SSW +K+ ++RA+L DF+R ++M+ + +K V++ LAK Sbjct: 33 AAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_DICDI (60S ribosomal protein L14 OS=Dictyostelium discoideum GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.348e-11 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 19 AVIVHVLDQNRALVDAPD--MERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKL 330 AVI+ VLDQNRALV P +ER +NFK ++LT +K++I R + TLI A++ AD++ K + S +K+ +++ DF+R K L + K V E+ KL Sbjct: 27 AVIIDVLDQNRALVAGPHSGVERHIINFKWINLTPLKVNIQRGARINTLIAAIKAADLETKIAALSAVKKINARATKSNQTDFERFKANLIRRKLNKKVSGEVKKL 132 The following BLAST results are available for this feature:
BLAST of FC871616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871616 ID=FC871616; Name=FC871616; organism=Citrus sinensis; type=EST; length=391bpback to top |