FC871524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.757e-11 Identity = 48/199 (24.12%), Postives = 98/199 (49.25%), Query Frame = 2 Query: 71 CGWHPDRKWIFSGANDKSICMWELGGKELECWKG--QRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD-DRTIRIW 649 C ++P + SG+ D+S+ +W++ K C K + +S + DG I + + + + D ++ ++++ +F S + K++L + L+ + LW+ + K + +Y GH+ S++ I + F +I SGSED ++YIW+ + +++ L GH+ V +P + + A + D I IW Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDV--KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS-KGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: GBLP_SOYBN (Guanine nucleotide-binding protein subunit beta-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.757e-11 Identity = 55/196 (28.06%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 98 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG-GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 661 I + + D+SI +W L ++ +R L + D+ ++SDG+ ++ + L L D A R++ + + S + S DN+ ++ ++ I LWN GE K + G S +V F Q I S S D V +W+ +C L L GH+G VN V+ +P + + AS D I +W L + Sbjct: 31 IVTASRDRSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ-DGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSP-DGSLCASGGKDGVILLWDLAE 224
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 50/207 (24.15%), Postives = 92/207 (44.44%), Query Frame = 2 Query: 68 SCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIG------------ALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 649 S + PD K++ +G D+ I +W++ K + +I L+ + DGK +++ + + L D EA ++ I D +T+ S D +F+ L++ I +W G LV + GH+ S + + G ++ SGS D+ + +W + GH + V+ +P + + S S DRTI+ W Sbjct: 339 SVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSG--TLVEQLHGHEESVYSVAFSPDG---KYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSP-DGKWIISGSKDRTIQFW 539
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 47/191 (24.61%), Postives = 88/191 (46.07%), Query Frame = 2 Query: 104 SGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNV 670 +G +D + +W + T + + + + + I+ + ++ + D EA + + I S +F+ + I LW+I + V +Y+GH ++ +R G ++AS ++D V +W + ++ PGH+G VN V ++P N ++LAS S DRTIR W L+ V Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV 223
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 47/191 (24.61%), Postives = 88/191 (46.07%), Query Frame = 2 Query: 104 SGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNV 670 +G +D + +W + T + + + + + I+ + ++ + D EA + + I S +F+ + I LW+I + V +Y+GH ++ +R G ++AS ++D V +W + ++ PGH+G VN V ++P N ++LAS S DRTIR W L+ V Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV 223
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: GBLP_DANRE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Danio rerio GN=gnb2l1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 51/195 (26.15%), Postives = 88/195 (45.13%), Query Frame = 2 Query: 98 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 661 I S + DK+I MW+L E QR L+ +SD+ ++SDG+ ++ + L L D R++ + + S + S DN+ ++ ++ I LWN G K + H +R ++ G D V +W+ A+C L GH+G +N V+ +P + + AS D +W L + Sbjct: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGW-DKMVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNE 223
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: DCAF8_PONAB (DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.115e-11 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 293 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW-----------GLKDLNVKRK 679 E IT S D LL + +++I+L+N + V +YKGH+ + V F G + F+ SGS+ +++W ++SC +I + G G VNC+ +P P +LA++ D ++IW GLKD+ K K Sbjct: 385 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNK 526
BLAST of FC871524 vs. ExPASy Swiss-Prot
Match: DCAF8_HUMAN (DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.115e-11 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 293 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW-----------GLKDLNVKRK 679 E IT S D LL + +++I+L+N + V +YKGH+ + V F G + F+ SGS+ +++W ++SC +I + G G VNC+ +P P +LA++ D ++IW GLKD+ K K Sbjct: 385 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNK 526 The following BLAST results are available for this feature:
BLAST of FC871524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871524 ID=FC871524; Name=FC871524; organism=Citrus sinensis; type=EST; length=954bpback to top |