FC871523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: GBLP_ARATH (Guanine nucleotide-binding protein subunit beta-like protein OS=Arabidopsis thaliana GN=ARCA PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.389e-12 Identity = 56/196 (28.57%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 98 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVE--RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG-GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 661 I S + DKSI +W+L + QR L + D+ ++SDG+ ++ + L L D A V R++ + + S + S DN+ ++ ++ I LWN GE K G +V F Q I S S D V +W+ ++C L L GH+G V+ V+ +P + + AS D + +W L + Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAE 225
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.814e-12 Identity = 56/220 (25.45%), Postives = 100/220 (45.45%), Query Frame = 2 Query: 8 WDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 658 W +G C H + +V ++P + +G+ D + +W++ G+E+ G +I L + G +IIT + +++ D KV I I+S S D +L +++ LW+ K VA GH ++ SCF + IA+ S D +++ + I L GH G ++ +S+NP +L + S D+T RIW ++ Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLA-EIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG-KCVATLTGHDDE--ILDSCFDYTGK-LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLL-TGSSDKTARIWDVQ 375
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: SNR40_DICDI (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum GN=snrnp40 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12 Identity = 60/226 (26.55%), Postives = 110/226 (48.67%), Query Frame = 2 Query: 8 WDVSSGNCL-HVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD---REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV---KLVAKYKGHKRS--RFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 658 WD + G + + E +G+ C + SG++D+S +++ K Q ++ + + Q+IT ++ + + D +E + TITS S+S+D +LL N ++ +W+I + + + G + + + +I+S + ++ I GS D QVYIW + L LPGHSG VN V+++P P ++AS S D+TI + +K Sbjct: 132 WDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKG-STHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWS-IDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEP-IIASCSSDKTIYLGEIK 354
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: GBLP_BRANA (Guanine nucleotide-binding protein subunit beta-like protein OS=Brassica napus GN=GB1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.094e-12 Identity = 56/196 (28.57%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 98 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVE--RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG-GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 661 I S + DKSI +W+L + QR L + D+ ++SDG+ ++ + L L D A V R++ + + S + S DN+ ++ ++ I LWN GE K G +V F Q I S S D V +W+ ++C L L GH+G V+ V+ +P + + AS D + +W L + Sbjct: 31 IVSASRDKSIIVWKLTKDDKSYGVRQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASCDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAE 225
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: GBLP_NICPL (Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12 Identity = 58/197 (29.44%), Postives = 94/197 (47.72%), Query Frame = 2 Query: 98 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV--IRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 661 I + + DKSI +W L + +R L + D+ ++SDG ++ + L L D +A R++ + + S + S DN+ ++ ++ I LWN GE K + + G S +V +R L Q I SGS D V IW+ +C L L GH+G VN + +P + + AS D I +W L + Sbjct: 32 IVTSSRDKSIIVWSLTKDGPQYGVPRRRLTGHGHFVQDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSADNRQIVSASRDKSIRLWNTLGECKYIIQ-DGDSHSDWVSCVRFSPNNL-QPTIVSGSWDRTVKIWNLTNCKLRATLAGHTGYVNTTAVSP-DGSLCASGGKDGVILLWDLAE 225
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: GBLP_MEDSA (Guanine nucleotide-binding protein subunit beta-like protein OS=Medicago sativa GN=GB1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12 Identity = 57/196 (29.08%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 98 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG-GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 661 I + + DKSI +W L ++ +R L + D+ ++SDG+ ++ + L L D A R++ + + S + S DN+ ++ ++ I LWN GE K + G S +V F Q I S S D V +W+ +C L L GHSG VN V+ +P + + AS D I +W L + Sbjct: 31 IVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ-DGDAHSDWVSCVRFSPSTPQPTIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSP-DGSLCASGGKDGVILLWDLAE 224
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.176e-11 Identity = 53/216 (24.54%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 8 WDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 649 WD +SG E G + S + PDR+ + SG++DK+I +W+ ++ + + DG+++ + + + + D + + ++ S + S D + + ++ I +W+ +GH S + + G +ASGS+D + IW AS L GH G V V ++P + +AS SDD TI+IW Sbjct: 868 WDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGT-CTQTLEGHGGSVWSVAFSPDGQR---VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIW 1078
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: SNR40_BOVIN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11 Identity = 53/219 (24.20%), Postives = 110/219 (50.23%), Query Frame = 2 Query: 8 WDVSSGNCLHVYEKAGLGLVSCGWHPDRKW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG--HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 634 WD +G + + + SC +P R+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + + D Y ++T SLS + +LL N ++ + +W++ + + V ++G H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P P +L+++SD R Sbjct: 137 WDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKR 351
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11 Identity = 57/230 (24.78%), Postives = 104/230 (45.22%), Query Frame = 2 Query: 8 WDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE---------LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE---VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH--MLASASDDRTIRIW 649 WD+ + H + L + S + D ++I SG+ DK +W+ LG +E+ G ++ + ++ DG+ + ++ + L D + +ERY ++ S + S D K L L++ + LW++ G + A + GHK FV+ F + +++ SGS+D V W + L GH +V V+ +P N + A+ S D R+W Sbjct: 354 WDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNG-----VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD--FVLSVAFSP-DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
BLAST of FC871523 vs. ExPASy Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11 Identity = 53/219 (24.20%), Postives = 110/219 (50.23%), Query Frame = 2 Query: 8 WDVSSGNCLHVYEKAGLGLVSCGWHPDRKW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG--HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 634 WD +G + + + SC +P R+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + + D Y ++T SLS + +LL N ++ + +W++ + + V ++G H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P P +L+++SD R Sbjct: 137 WDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKR 351 The following BLAST results are available for this feature:
BLAST of FC871523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871523 ID=FC871523; Name=FC871523; organism=Citrus sinensis; type=EST; length=910bpback to top |