EY679775

Overview
NameEY679775
Unique NameEY679775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679775 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11
Identity = 37/79 (46.84%), Postives = 56/79 (70.89%), Query Frame = 2 
Query:    2 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLVVGISSGWSCGWLHLKLQKNQKMAGKLFVVYFSPYLLEKRYPPSVVF 238
            G L+ +++DEV+++SSDEA+ETAK LAL+EGL+VGISSG +     +++ K  + AGKL  V F  +   +RY  S++F
Sbjct:  285 GNLDQDVMDEVIEISSDEAVETAKQLALQEGLLVGISSG-AAALAAIQVAKRPENAGKLIAVVFPSF--GERYLSSILF 360
[Close]
BLAST of EY679775 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11
Identity = 37/79 (46.84%), Postives = 56/79 (70.89%), Query Frame = 2 
Query:    2 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLVVGISSGWSCGWLHLKLQKNQKMAGKLFVVYFSPYLLEKRYPPSVVF 238
            G L+ +++DEV+++SSDEA+ETA+ LAL+EGL+VGISSG +     +++ K  + AGKL  V F  Y   +RY  S++F
Sbjct:  297 GNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSG-AAALAAIQVGKRPENAGKLIGVVFPSY--GERYLSSILF 372
The following BLAST results are available for this feature:
BLAST of EY679775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYSKP_CAPAN5.443e-1146.84Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SOLTU9.285e-1146.84Cysteine synthase, chloroplastic/chromoplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-H04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679775 ID=EY679775; Name=EY679775; organism=Citrus sinensis; type=EST; length=500bp
TGGTGTTTTGGAAGTCAATATCATTGATGAAGTTGTTCAAGTATCGAGTG
ATGAAGCAATTGAGACTGCAAAACTTCTTGCGCTGAAAGAAGGCTTGGTT
GTGGGAATATCATCCGGGTGGAGCTGCGGCTGGCTGCATTTGAAATTGCA
AAAAAACCAAAAAATGGCGGGAAAACTCTTTGTCGTTTATTTTTCCCCCT
ACCTTTTGGAAAAAAGGTACCCCCCTTCCGTGGTGTTTTGAATCAATGGA
GGAAAGAAGGGGGAAAACATGGACTTTCCAAGGCCGGAACCGTCCCCTAG
AATTTTGAATAAATTTTAATAAAAAAATTAGGTTGGGTTTTTTTTTTTTT
TTTTTTTATTTGAAAACATTTGGATAAAAAAAACATAAAAAGTGGGTCCG
TATACGGCACGGACCGTGTGTGGGGCGTTGGTGGGGGGTTTCCCACGATA
AGCCTACCTGGCGTCAACGCGGCGTAAAACACCAGGGCGGCCACACAACA
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