FC871388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACC3 (Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus (strain 03BB102) GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACC1 (Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus (strain ATCC 10987) GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACC0 (Ribosomal RNA small subunit methyltransferase G OS=Bacillus cereus (strain AH820) GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACAN (Ribosomal RNA small subunit methyltransferase G OS=Bacillus anthracis GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACAH (Ribosomal RNA small subunit methyltransferase G OS=Bacillus thuringiensis (strain Al Hakam) GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACAC (Ribosomal RNA small subunit methyltransferase G OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACAA (Ribosomal RNA small subunit methyltransferase G OS=Bacillus anthracis (strain A0248) GN=rsmG PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N + A++++G L ++ + + +R ++ K R+TPKKYPR GTP K+P+ Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKYALEVLGGDLKEMSTFQLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_LACS1 (Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rsmG PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21 Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 55 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 GK RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+KN+++A++++G ++ + E +R +V K + TPKKYPR AGTPAK P+ Sbjct: 135 GKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELKNAQKAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_EXIS2 (Ribosomal RNA small subunit methyltransferase G OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rsmG PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + GK+ FRE +DV ARAVA M +LAEYCLPL RVGG FVA K EE++ A++++G +L + + +R V+ K R TP KYPR AGTPAK PL Sbjct: 127 RAEEFGKNKQFREHFDVVTARAVARMSVLAEYCLPLARVGGQFVALKAAKLGEELEEGATALKVLGGNLRESFQFQLPGEESERNIVIVDKKRLTPGKYPRKAGTPAKDPL 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_CLOTH (Ribosomal RNA small subunit methyltransferase G OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rsmG PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G D +RE+YD++VARAVA + +L EYCLP V+VGG F+A KG+ EEV+NS++A++++G + + +E PF +R +V K R+TP KYPR +G P+K PL Sbjct: 132 RAEEKGVDPDYREKYDISVARAVASLPVLLEYCLPFVKVGGCFIAMKGNS-TEEVENSKKALEILGGKIEDI--LEFNLPFSDIKRNVIVIKKFRQTPTKYPRKSGKPSKNPL 241 The following BLAST results are available for this feature:
BLAST of FC871388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871388 ID=FC871388; Name=FC871388; organism=Citrus sinensis; type=EST; length=616bpback to top |