FC871388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_CLOPE (Ribosomal RNA small subunit methyltransferase G OS=Clostridium perfringens GN=rsmG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15 Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE + V+ K + TPK +PR AG K PL Sbjct: 128 RAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_CLOP1 (Ribosomal RNA small subunit methyltransferase G OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rsmG PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15 Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S+ A+ +G L + VE + V+ K + TPK +PR AG K PL Sbjct: 128 RAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDSKNAIGTLGGKLKGITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_LACRJ (Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus reuteri (strain JCM 1112) GN=rsmG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14 Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 40 RGQTLGKDVS-FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T S +RE++D+ ARAVA + +L+E CLP +VGG F+A K EE++ A++ +G + + ++ +R +V K + TPKKYPR G P+K P+ Sbjct: 129 RAETFSAKTSPYREKFDIVTARAVARLSVLSELCLPAAKVGGEFIAYKASAAPEELQQGGTAIKQLGGKVQKTVTLTLPGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_LACRD (Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus reuteri (strain DSM 20016) GN=rsmG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14 Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 40 RGQTLGKDVS-FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T S +RE++D+ ARAVA + +L+E CLP +VGG F+A K EE++ A++ +G + + ++ +R +V K + TPKKYPR G P+K P+ Sbjct: 129 RAETFSAKTSPYREKFDIVTARAVARLSVLSELCLPAAKVGGEFIAYKASAAPEELQQGGTAIKQLGGKVQKTVTLTLPGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_ANATD (Ribosomal RNA small subunit methyltransferase G OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rsmG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 36/111 (32.43%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + LG+ FRE++D ARAV + +L EY +PL++VGG F+A KG + ++E+ ++ A++++G + + +R+ ++ K R+TP +PR+ K PL Sbjct: 128 RAEVLGRKEEFREKFDFVFARAVDRLNVLCEYAIPLLKVGGAFLAQKGFECEDEIDLAKNAIEILGGEIYSIEKFVLPYSDEKRSIIIIKKLRQTPSNFPRNTKQIVKKPL 238
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STRMU (Ribosomal RNA small subunit methyltransferase G OS=Streptococcus mutans GN=rsmG PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14 Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE+K ++ A+ L+ + S Q P G R + K + TP KYPR AG P K PL Sbjct: 128 RAEVFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEELKTAQNALNLLFSQTTS--SDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STRPM (Ribosomal RNA small subunit methyltransferase G OS=Streptococcus pyogenes serotype M28 GN=rsmG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P G R + K + TP KYPR AG P K PL Sbjct: 128 RAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STRPF (Ribosomal RNA small subunit methyltransferase G OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rsmG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P G R + K + TP KYPR AG P K PL Sbjct: 128 RAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STRPD (Ribosomal RNA small subunit methyltransferase G OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rsmG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P G R + K + TP KYPR AG P K PL Sbjct: 128 RAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STRPC (Ribosomal RNA small subunit methyltransferase G OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rsmG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++ A+ L+ +++ S Q P G R + K + TP KYPR AG P K PL Sbjct: 128 RAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKNALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237 The following BLAST results are available for this feature:
BLAST of FC871388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871388 ID=FC871388; Name=FC871388; organism=Citrus sinensis; type=EST; length=616bpback to top |