FC871388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_LEUCK (Ribosomal RNA small subunit methyltransferase G OS=Leuconostoc citreum (strain KM20) GN=rsmG PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.251e-18 Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + +G++V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + ++A+ +G +L + + + P G QR V K ++TPKKYPR AGTP K P+ Sbjct: 129 RAEDIGQNVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQQALATLGGTLSS--AFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPI 238
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STAHJ (Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rsmG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T GK V+ RE YDV ARAVA + +L+E CLPLV+ GG F+A K +EE++ ++ + ++G + + G+R ++ K R+T KKYPR GTP K PL Sbjct: 128 RAETFGKGVN-RETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELEEAQFGISILGGVFSDSYTFDLPEDAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACP2 (Ribosomal RNA small subunit methyltransferase G OS=Bacillus pumilus (strain SAFR-032) GN=rsmG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K EE++ ++AV ++G +++ S +R +V K ++TPKKYPR GTP K P+ Sbjct: 127 RAETFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAGKKAVTVLGGEVVEKHSFVLPLEESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_LYSSC (Ribosomal RNA small subunit methyltransferase G OS=Lysinibacillus sphaericus (strain C3-41) GN=rsmG PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G+++ +REQYDV ARAVA + +L+E C+PL + GG FVA K EE+K++++A+ +G L + S + R + K + TPKKYPR G P K P+ Sbjct: 127 RAEEFGQNIKYREQYDVVTARAVARLSVLSELCVPLAKQGGYFVALKAAAGAEELKDAKKALTTLGVKLKEEYSFKLPVEESDRILYIFDKIKGTPKKYPRKPGVPNKTPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_LISMH (Ribosomal RNA small subunit methyltransferase G OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rsmG PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+A++L G + + + +R V K++ TP KYPR GTP K+P+ Sbjct: 127 RAEIFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFAFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_BACA2 (Ribosomal RNA small subunit methyltransferase G OS=Bacillus amyloliquefaciens (strain FZB42) GN=rsmG PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17 Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T G+ RE +D+ ARAVA + +L+E CLPL + G+F A K EE+K ++A++++G L Q+ S +R ++ K++ TPKKYPR GTP K P+ Sbjct: 127 RAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKKNGVFAALKAAAADEELKAGQKAIKVLGGELEQVHSFTLPVEESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_CARHZ (Ribosomal RNA small subunit methyltransferase G OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rsmG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + LG+ FRE +DV +RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A + +G L + FG+R+ VV K + TP+ YPR G P K PL Sbjct: 125 RAENLGRQKPFRELFDVTFSRAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKAAKQLGMELKDVYYYRLPGNFGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_DESHY (Ribosomal RNA small subunit methyltransferase G OS=Desulfitobacterium hafniense (strain Y51) GN=rsmG PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R + +D +RE +D +RAVA + +L EY +PL++ GG F+AAKG QEEV S++A+ ++GA + + + R ++ K+ TP YPR AGTP K PL Sbjct: 128 RAEDFARDPHYRETFDCVTSRAVARLPVLLEYAVPLLKKGGYFLAAKGSQAQEEVMESKKALTVLGAEIKDIKLFNLGAEAEHRAIILVEKTSSTPPAYPRKAGTPGKKPL 238
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_STACT (Ribosomal RNA small subunit methyltransferase G OS=Staphylococcus carnosus (strain TM300) GN=rsmG PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 73 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ + + + G + + + E G+R ++ K +TPKKYPR AGTP K PL Sbjct: 139 RESYDIVTARAVARLSVLSELCLPLVKTGGHFIAMKSSKGEEELEEARFGIGVFGGRVEAVETFELPGDAGERQMIIIEKRSKTPKKYPRKAGTPNKSPL 238
BLAST of FC871388 vs. ExPASy Swiss-Prot
Match: RSMG_ROSS1 (Ribosomal RNA small subunit methyltransferase G OS=Roseiflexus sp. (strain RS-1) GN=rsmG PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17 Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 40 RGQTLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL--CSVESQSPFGQRTAVVCLKSRRTPKKYPRDAGTPAKVPL 372 R +T+G+D REQYDV ARAVAE+ LAEYCLPL RV G +A KG D +EV + A++ +G ++ + ++ P RT VV K T YPR G PA+ P+ Sbjct: 124 RAETVGRDPQHREQYDVVTARAVAELATLAEYCLPLCRVHGRVLAPKGSDIADEVARARTAIERLGGRVIDVEPVTIPGVEP---RTLVVIAKVAPTLAAYPRAVGVPARRPI 233 The following BLAST results are available for this feature:
BLAST of FC871388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871388 ID=FC871388; Name=FC871388; organism=Citrus sinensis; type=EST; length=616bpback to top |