FC871384

Overview
NameFC871384
Unique NameFC871384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871384 vs. ExPASy Swiss-Prot
Match: DGKH_HUMAN (Diacylglycerol kinase eta OS=Homo sapiens GN=DGKH PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 3
Query:  192 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 518
            +P++VF+NS+SG   G +   R ++L+   QVFDL    PH     GL   +K                RI+V GGDG+VGWVL  + +LN   +     + ++PLGTG
Sbjct:  331 SPLLVFVNSKSGDNQGVKFLRRFKQLLNPAQVFDLMNGGPH----LGLRLFQKF------------DNFRILVCGGDGSVGWVLSEIDKLNLNKQ---CQLGVLPLGTG 420          
BLAST of FC871384 vs. ExPASy Swiss-Prot
Match: DGKD_HUMAN (Diacylglycerol kinase delta OS=Homo sapiens GN=DGKD PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 3
Query:  183 PPE--APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 518
            PP   +P++VF+NS+SG   G +   R ++L+   QVFDL    PH     GL   +K          DT    RI+V GGDG+VGWVL  +  LN   +     + ++PLGTG
Sbjct:  315 PPSCTSPLLVFVNSKSGDNQGVKFLRRFKQLLNPAQVFDLMNGGPH----LGLRLFQKF---------DT---FRILVCGGDGSVGWVLSEIDSLNLHKQ---CQLGVLPLGTG 409          
BLAST of FC871384 vs. ExPASy Swiss-Prot
Match: DGKA_RAT (Diacylglycerol kinase alpha OS=Rattus norvegicus GN=Dgka PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 3
Query:  195 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 518
            P++VFIN +SGG+ G  +  + Q ++   QVF+L +                  E G    KD  Q  R++V GGDGTVGW+L ++   +K     VPPVA++PLGTG
Sbjct:  369 PLLVFINPKSGGKQGQSVLWKFQYILNPRQVFNLKDG----------------PEPGLRFFKDVPQ-FRVLVCGGDGTVGWILETI---DKANFPIVPPVAVLPLGTG 456          
BLAST of FC871384 vs. ExPASy Swiss-Prot
Match: DGK1_ARATH (Diacylglycerol kinase 1 OS=Arabidopsis thaliana GN=DGK1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11
Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  195 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 518
            P++VFIN +SG + G  L++RL   +   QVF+LS V+  E    GL    K+               R++V GGDGT GWVL ++    KQ     P VAI+P GTG
Sbjct:  361 PLLVFINKKSGAQRGDSLRQRLHLHLNPVQVFELSSVQGPE---VGLFLFRKVPH------------FRVLVCGGDGTAGWVLDAI---EKQNFISPPAVAILPAGTG 450          
The following BLAST results are available for this feature:
BLAST of FC871384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DGKH_HUMAN3.781e-1135.78Diacylglycerol kinase eta OS=Homo sapiens GN=DGKH ... [more]
DGKD_HUMAN3.781e-1137.72Diacylglycerol kinase delta OS=Homo sapiens GN=DGK... [more]
DGKA_RAT4.938e-1137.96Diacylglycerol kinase alpha OS=Rattus norvegicus G... [more]
DGK1_ARATH4.938e-1138.89Diacylglycerol kinase 1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CE08FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CE08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871384 ID=FC871384; Name=FC871384; organism=Citrus sinensis; type=EST; length=536bp
TTGACGCTTTTCCTGGCTGCGGGTTGTTGGGGATGCTAATTGATTAAGAG
GATTTAAGGCGGAAGCTTTCGATACCGGAGTATTTGCGAGTCGCGATGAG
CAACGCGATTAGGCGGAAGGAAGGCGAGCCGCCGGCTGATACCTGCCAGA
GCGATGTAATCGTTGACGGTAACGGCGTTCAGCCGCCGGAAGCGCCGATG
GTTGTTTTTATAAATTCGCGCAGCGGTGGACGGCACGGGCCTGAGTTGAA
GGAGCGCCTCCAGGAATTGATGGGAAAAGAACAGGTTTTTGATTTATCAG
AGGTGAAACCACATGAGTTTGTCCAGTATGGATTGGCTTGTTTGGAGAAG
TTGGCTGAGCTTGGTGACTTTTGTGCCAAAGATACTCGTCAAAAGATGAG
AATAGTGGTTGCTGGAGGTGATGGTACGGTTGGTTGGGTACTAGGAAGTG
TTGGTGAACTTAACAAACAGGGCCGGGAGCCAGTTCCTCCAGTAGCAATT
ATTCCACTTGGTACAGGGAAATGACCTCTCTAGGAG
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