FC871369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_BACCZ (30S ribosomal protein S5 OS=Bacillus cereus (strain ZK / E33L) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ + S GS Sbjct: 10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLGS 130
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_BACCR (30S ribosomal protein S5 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ + S GS Sbjct: 11 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLGS 131
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_BACC1 (30S ribosomal protein S5 OS=Bacillus cereus (strain ATCC 10987) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ + S GS Sbjct: 10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLGS 130
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_BACAN (30S ribosomal protein S5 OS=Bacillus anthracis GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ + S GS Sbjct: 10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLGS 130
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_BACAH (30S ribosomal protein S5 OS=Bacillus thuringiensis (strain Al Hakam) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ + S GS Sbjct: 11 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLGS 131
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_ANATD (30S ribosomal protein S5 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 306 GHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 G LK+ V+ I V K + G+R +F A VVVGD +GHVG G + E+ AIR AI AK +I V +G T+P + G G+ V + PAP G G++A + V + AGI D+ T S GS Sbjct: 10 GLDLKERVVNINRVAKVVKGGKRLKFSAIVVVGDENGHVGAGHGKAAEIPDAIRKAIEDAKKHLIEV------PIVGT--TIPHEAIGDFGASKVLIKPAPEGTGVIAGGAVRAVCELAGIKDIRTKSLGS 132
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_PROA2 (30S ribosomal protein S5 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14 Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 315 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 701 LK++++ I K + G+R F A VVVGD +GHVG G+ + EV AI + K +V+ P+ +G T+P +V K GS V M PA G G++A + VL+ AGI D+ T S GS+ Sbjct: 16 LKEKLVHINRTAKVVKGGKRFGFNAIVVVGDKEGHVGYGLGKANEVQDAIAKGVEDGKKNVVKVPIVKG----------TIPHQVVAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSS 136
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_CHLL2 (30S ribosomal protein S5 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 315 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 701 LK++++ I K + G+R F A VVVGD +GHVG G+ + EV AI + K +VI P+ +G T+P +V K GS V M PA G G++A + VL+ AG+ DV T S GS+ Sbjct: 16 LKEKLVHINRTAKVVKGGKRFGFNAIVVVGDREGHVGYGLGKANEVQDAIAKGVEDGKKNVIKVPIVKG----------TIPHQVIAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGVHDVLTKSLGSS 136
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RR5_EMIHU (30S ribosomal protein S5, chloroplastic OS=Emiliania huxleyi GN=rps5 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14 Identity = 42/133 (31.58%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 318 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 716 ++ V+ + V K + G++ F+A VVVGD G VG+GV + +V+TA+R + K +VI V + +++P K+ G+ G+ + + P+ G G++A P+ VL+ AGI ++ + GS L N Sbjct: 18 EERVVSVQRVTKVVKGGKKLSFRAVVVVGDQQGKVGVGVGKASDVSTAVRKGVTDGKKNVITV-------PLTSSNSIPHKINGRFGAAKLVLRPSAPGCGVIAGGAPRIVLELAGIKNILSKQLGSNSLLNN 143
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_LEPBL (30S ribosomal protein S5 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=rpsE1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14 Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 3 Query: 321 DEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKGNL 734 ++V+KI V K + G+R F A VVGD G VG+G + EV AIR +I AK ++ + + HT+P +V GK S V + P+ G GI+A + +++ AGI DV T S GS+ + N VK L Sbjct: 13 EKVVKIDRVAKVVKGGRRFSFNALSVVGDQKGKVGIGFGKANEVPDAIRKSIEAAKKHLVKINF--------KGHTIPHEVVGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSSNPV-NIVKATL 141 The following BLAST results are available for this feature:
BLAST of FC871369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871369 ID=FC871369; Name=FC871369; organism=Citrus sinensis; type=EST; length=773bpback to top |