FC871369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_CLOP1 (30S ribosomal protein S5 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 315 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKGNL 734 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP ++ GK G+ V ++PA G G++A + VL+ AG+ DV S GS N VK + Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIAGGPARSVLELAGLKDVRAKSLGSNNP-RNMVKATI 140
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_BACSK (30S ribosomal protein S5 OS=Bacillus clausii (strain KSM-K16) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15 Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKGNL 734 +L+++V+ I V K + G+R RF A VVVGD +GHVG G+ ++EV AIR A+ AK ++I V T+P ++ G+ G+ V + PA G G++A + VL+ AGI DV + S GS+ + N V+ + Sbjct: 10 ELEEKVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGMGKAQEVPEAIRKAVEDAKKNLIEVPI--------VNTTIPHQIVGRFGAGRVFLKPASEGTGVIAGGPVRAVLELAGIGDVLSKSLGSSNPI-NMVRATI 141
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_UREU1 (30S ribosomal protein S5 OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 318 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGA 169
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_UREPA (30S ribosomal protein S5 OS=Ureaplasma parvum GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 318 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGA 169
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_UREP2 (30S ribosomal protein S5 OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 318 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGA 169
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_OCEIH (30S ribosomal protein S5 OS=Oceanobacillus iheyensis GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15 Identity = 50/140 (35.71%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 315 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKGNL 734 L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AI+ A+ AK ++I V +G T+P ++ G+ GS V M PA G G+++ + +L+ AG+ D+ T S GS + N ++ L Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPI-NMIRATL 142
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_PEDPA (30S ribosomal protein S5 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15 Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 725 +++D V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ A+ S+I V +G T+P + G G + M PA G+G+ A + V++ AGIDDV TS R + T N V+ Sbjct: 11 EIEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVETARKSLIEV------PIVGT--TLPHEAVGVYGGGRILMKPALEGSGVAAGGAVRAVMELAGIDDV-TSKRLGSNTAVNVVR 139
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_GEOSW (30S ribosomal protein S5 OS=Geobacillus sp. (strain WCH70) GN=rpsE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15 Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKGNL 734 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ + S GS + N V+ + Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATV 141
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_FUSNN (30S ribosomal protein S5 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpsE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15 Identity = 40/130 (30.77%), Postives = 73/130 (56.15%), Query Frame = 3 Query: 309 HKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 698 ++ +++++KI V K T+ G+ F VGD +G +GLG+ + V AIR AI AK +++ + + +T+P ++ GK G+ T+ M PA G G++A +++L+ G+ D+ T +GS Sbjct: 7 NQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
BLAST of FC871369 vs. ExPASy Swiss-Prot
Match: RS5_STACT (30S ribosomal protein S5 OS=Staphylococcus carnosus (strain TM300) GN=rpsE PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.633e-15 Identity = 51/141 (36.17%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 312 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKGNL 734 + ++ V+ I V K + G+R RF A VVVGD G VG G ++EV AI+ A+ AK ++ V R T P +TG+ GS +V + PA G G++A + VL+ AGI D+ + S GS + N V+ L Sbjct: 10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKKGRVGFGTGKAQEVPEAIKKAVEAAKKDLVTVNR--------VEGTTPHTITGRFGSGSVLLKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPI-NMVRATL 141 The following BLAST results are available for this feature:
BLAST of FC871369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871369 ID=FC871369; Name=FC871369; organism=Citrus sinensis; type=EST; length=773bpback to top |