EY679001

Overview
NameEY679001
Unique NameEY679001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.821e-11
Identity = 34/101 (33.66%), Postives = 63/101 (62.38%), Query Frame = 2
Query:   50 DEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKV-EESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESS 349
            +E +  F  L + + PVV  A E  N  +LP+++E LR+++K  P    K+ EE+G+H + G GEL+L+  +  L++ +  +EV V++P+V + E++ + S
Sbjct:  374 EEQIEPFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLQKDWG-IEVDVSEPIVVYRESITKPS 473          

HSP 2 Score: 23.8682 bits (50), Expect = 5.821e-11
Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 3
Query:  369 KLPTKKNKITMIAEPLERGLAEDIENGVV 455
            K P K N+  ++ EP+   + + I+ G++
Sbjct:  479 KSPNKHNRFYVVVEPMPDEIYQAIKEGII 507          
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 7.555e-11
Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 2
Query:   29 TLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKV-EESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESS 349
            T+C+ E  + +  F  L   + PVV  A E  N  +LPK++E LR+++K  P    ++ EE+GEH + G GEL+L+ I   +++    VE++ ++P+V + ETV + S
Sbjct:  371 TICSPE--DKIKEFEGLDHISEPVVTVAVEAKNTKDLPKLIEVLRQVAKEDPTIKVEINEETGEHLVSGMGELHLEVISYRIKD--KGVEIQTSEPIVVYRETVSQLS 474          

HSP 2 Score: 23.0978 bits (48), Expect = 7.555e-11
Identity = 10/27 (37.04%), Postives = 15/27 (55.56%), Query Frame = 3
Query:  369 KLPTKKNKITMIAEPLERGLAEDIENG 449
            K P K N+  +  EPLE  L + ++ G
Sbjct:  480 KSPNKHNRFYITVEPLEDELFKALQEG 506          
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.556e-11
Identity = 38/119 (31.93%), Postives = 69/119 (57.98%), Query Frame = 2
Query:   29 TLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKV-EESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQ 382
            T+C+   D+ +  F  +   + PV+  A E  N  +LPK++E LR++++  P    ++ EE+GEH + G GEL+++ I K   E  + + V+V  P+V + ETV   S +   +++PN+
Sbjct:  371 TICSP--DKIIEPFEAITHISEPVITVAIEAKNTKDLPKLIEVLRQVAREDPTVKVEINEETGEHLLSGMGELHIEIITKLKIERDAGIPVEVGQPIVVYRETVTGQSPV-VESKSPNK 486          

HSP 2 Score: 25.7942 bits (55), Expect = 7.556e-11
Identity = 10/27 (37.04%), Postives = 15/27 (55.56%), Query Frame = 3
Query:  369 KLPTKKNKITMIAEPLERGLAEDIENG 449
            K P K NK+  + EPLE  + +  + G
Sbjct:  482 KSPNKHNKLYFVVEPLEESVLQAYKEG 508          
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 34/103 (33.01%), Postives = 66/103 (64.08%), Query Frame = 2
Query:   50 DEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKV-EESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSM 355
            +E +  F  L + + PVV  A E  N  +LP+++E LR+++K  P    K+ EE+G+H + G GEL+L+  +  L++ +  ++++V++P+V + E++ +SS M
Sbjct:  374 EEQIEPFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLKKDWG-IDIEVSEPIVVYRESITKSSPM 475          
The following BLAST results are available for this feature:
BLAST of EY679001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
EF2_PYRFU5.821e-1133.66Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_METS37.555e-1135.19Elongation factor 2 OS=Methanobrevibacter smithii ... [more]
EF2_METJA7.556e-1131.93Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_PYRHO9.845e-1133.01Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-053-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679001 ID=EY679001; Name=EY679001; organism=Citrus sinensis; type=EST; length=905bp
TGTGGATGCATCAATTATGAAATCCGCTACTCTCTGTAACCTAGAGTATG
ATGAAGATGTTTACATCTTCCGGCCTCTTCAATTCAATACCCTTCCAGTG
GTGAAAACAGCTACTGAGCCTCTAAACCCCAGTGAGTTGCCTAAAATGGT
GGAGGGTCTTAGGAAAATTAGCAAAAGCTATCCTCTAGCCATCACTAAAG
TTGAGGAGTCTGGAGAGCATACTATATTGGGTACTGGAGAGTTGTACTTG
GATTCAATTATGAAAGATCTGAGAGAGCTCTATTCTGAAGTTGAAGTCAA
GGTGGCAGATCCTGTTGTCTCATTCTGTGAAACAGTGGTGGAGTCTTCAT
CGATGAAGTGTTTTGCTGAAACTCCCAACCAAGAAAAATAAAATAACCAT
GATTGCAGAACCATTGGAGAGAGGACTTGCCGAGGATATTGAGAACGGCG
TTGTAAGTATTGAATTGGGAGTCTGAAGACGCTTGGTGATTTCTTTAAAA
CAAAAATATGACTGGGGATTTTACTTTGAGCACGATTCTATATGGGCATT
TGGACCTGAAAAGCAGGGACCAAATTTTTTATTAGATGAACACTATCCCC
AACGAAAATTGAAAAAAAACTTTGCTTAATGGCTGTAAAGGATTCTCCTT
GTTTCTGGCTTTTCAAGGGGGTGGTTCGTAAAAAGACCCCTTCTGGGTTT
AAACCTATAAAAAAATGTCTAATTTATAATTATGTCAAAGCATGGGAATG
AGCCCTTAAACCCGTCTGACTGAAGAGTATTAGGGCTCAAAATTTTTTCC
CCAGAGCTCATAAGAGGAGGGTATAATATCAAATTTATTTTATTTGGTTC
CCTCCACCTCGTTTATATGTAAAAAGCGTGGGTATAAATTTGTTGAAAAA
TATAA
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