EY680431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: RHGA_ASPAC (Rhamnogalacturonase A OS=Aspergillus aculeatus GN=rhgA PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16 Identity = 60/217 (27.65%), Postives = 105/217 (48.39%), Query Frame = 2 Query: 74 LRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSRITYERVKGT----YTVKPVHFACSDSLPCVDVTLSVIKL 712 LR + +V + + ++P H D C V+++++ G+ DGI + S ++ +H + D+CV++++ +N+ V ++ C G ++GSLG D V++I R+V ++ IK+ GGSG+V VL N + ID ++ + V L+ IT + KGT T P+ CSD+ PC D+TL I + Sbjct: 148 LRLTDVTHFSVHDVILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWGS-NIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGADTD---VTDIVYRNVYTWSSNQMYMIKS-NGGSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAG--DGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAI 356
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR1_ASPAC (Polygalacturonase 1 OS=Aspergillus aculeatus GN=pga1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16 Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 2 Query: 62 KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSV-SSPGDSP---NTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLG--KDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV-QLPIVIDQFYCDKSTCKNQTSAVALSRITYERVKGT 634 KP + N ++G+ I NSP + + D+++ +S GD NTD + S V I + + DDCV++ +G N+Y C GHG+SIGS+G DNT V N+T D + N+ NGVRIKT +GSV V + +I ++ + + IV+ Q Y D T T+ V ++ + V G+ Sbjct: 142 KPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGRSDNT---VKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD--TSSTPTTGVPITDFVLDNVHGS 333
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR_GIBFU (Polygalacturonase OS=Gibberella fujikuroi GN=PGA PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.418e-15 Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 2 Query: 95 NVTVTGITIQNSP-QCH------------LKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLG--KDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQ-LPIVIDQFYCDKSTCKNQTSAVALSRITYERVKGT 634 N +T + IQN P C L DN G + S S P + NTDG + +S V + +++ DDCV++ +G +N+ V N+ C GHG+SIGS+G DN V + + N+ NG RIK+ G +G++ V + NI ++ + + + Q Y + T+ V +S I + +V GT Sbjct: 138 NSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPA-AHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIVVSNMYCSGGHGLSIGSVGGKSDNV---VDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVTGT 328
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR2_RALSO (Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11 Identity = 56/200 (28.00%), Postives = 88/200 (44.00%), Query Frame = 2 Query: 65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSP-------------GDSP---------------NTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSN----VYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMH----NTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFY 556 P ++ Y T+ G+T+QNSP H+ GV + + +P G +P NTDG S +V++ S + GDD V+++ ++ HN + GHG+SIGS T VSN+ V D+ M + NG+RIK+ G V +++ I + V+ P+V D FY Sbjct: 205 PRLIQTYNGSAFTLYGVTVQNSPNFHIVTTGTSGVTAWGIKIVTPSLAYAVAGYKCPSGSTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLAYSYINTGDDHVAVKASSGPTRNLLFAHN-HFYYGHGLSIGS----ETNTGVSNMLVTDLTMDGNDSSAGNGLRIKSDASRGGKVTNIVYDGICMRNVKEPLVFDPFY 399
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR1_RALSO (Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11 Identity = 57/200 (28.50%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSP-------------GDSP---------------NTDGIHLQNSKDVLIHTSNLACGDDCVSIQT--GCSN--VYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTM----NGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFY 556 P ++ Y T+ +T+QNSP H+ GV + + +P G +P NTDG S +V++ S ++ GDD V+I+ G + ++ HN + GHG+SIGS T VSN+ V D+ M NG+RIK+ G V ++++ I + V+ P+V D FY Sbjct: 207 PRLVQLYNGSAFTLYRVTVQNSPNFHIVTTGTAGVTAWGIKIVTPSLAYTVPGYKCAAGTTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLANSYISTGDDHVAIKASGGATRNLLFAHN-HFYYGHGLSIGS----ETDGGVSNMQVTDLAMDGNDSSGGNGLRIKSDISRGGKVNNIVYNGICMRNVKEPLVFDPFY 401 The following BLAST results are available for this feature:
BLAST of EY680431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680431 ID=EY680431; Name=EY680431; organism=Citrus sinensis; type=EST; length=837bpback to top |