DY257284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.221e-26 Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 2 Query: 65 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 706 +GVF+ T LV + E L + VV+T I G+ ++G L GN NG LLP+ ++ +E+Q R +P + + +RL+A+GN + ND AL H +L E+IA L VEV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT N G++++ +GL N GS+TT EL IE E Sbjct: 13 IGVFATCTEDLALVPPLTKPEVCTILEEALD--VRVVETLINGSTVVGALSRGNSNGFLLPYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPELGRIEEALGFLE 219
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.788e-26 Identity = 66/179 (36.87%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 164 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 700 + VV+T++ G+ ++G L A N NG L P + E++ +R V V + +++A+GN + NDH AL H DLD E+I VLG V R + G VGS +++G +VHP + E+++ +S +L V + GTVNRGS + G+ VN A G DTT EL+ +E L Sbjct: 45 VEVVRTTVAGSNLVGALLAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVVNSKGAVVGEDTTGPELARLEDALYL 220
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.462e-26 Identity = 74/214 (34.58%), Postives = 109/214 (50.93%), Query Frame = 2 Query: 65 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 706 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T E++ L V + + +L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG +N+G LVHP + +++ L L ++P+ GT N G++++ +GL N GSDTT EL IE E Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLD--ARIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAGSDTTGPELGRIEEALGFLE 219
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.462e-26 Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 2 Query: 47 FENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 706 F +GVF+++ ++ E F + L + ++ T+I G+ IIG L AGN GL++ TD+EL L+ V + E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G +VHP + +++ L T+ +P+ GT+N GS ++ GL VND G+ T+ EL +E VF E Sbjct: 7 FAGDPNIGVFARVAGNIAVIPPEAPEEFRNAIREGLG--VELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAVLKKHRK----VMLLCETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKGVIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVNDTGYLAGNATSGFELGRVEDVFGFLE 220
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_NATPD (Translation initiation factor 6 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif6 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.455e-25 Identity = 78/216 (36.11%), Postives = 104/216 (48.15%), Query Frame = 2 Query: 38 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 R S VGVF+ T+ Y LV ES S FE EL + V T+I G+ +G L GN+NGLL+ TD+E L VV + ++A GN + N+ A H DL R+ I + L V V R IA VG+ ++ G L HP T+ E LD L L V GT+N G ++ +GL N+ G +TT EL IE Sbjct: 3 RAALSGSSYVGVFATATDEYLLVRPDIEESLQSEFETELD--VTAVPTTIAGSGTVGSLAVGNENGLLVTERVTDRERDRLETETGLPVV--ELPGNINAAGNVVLANNEGAFVHPDLSRDALSAIEEALSVPVERGRIADVQTVGTAAVVTDDGVLSHPKTTDEKLDFLEELFGVYADIGTINYGGPLVGSGLVANNTGYIAGEETTGPELGRIE 214
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.470e-25 Identity = 71/207 (34.30%), Postives = 109/207 (52.66%), Query Frame = 2 Query: 65 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 +GVF+ T +V IG + +L + V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +NRG LVHP + ++L L + +P+ GT N GS+ + +GL N GS+TT EL +E Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLLAEQLD--VKVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLANSKGYVAGSNTTGHELGRVE 211
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_SULSO (Translation initiation factor 6 OS=Sulfolobus solfataricus GN=eif6 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24 Identity = 76/219 (34.70%), Postives = 118/219 (53.88%), Query Frame = 2 Query: 38 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVE-VFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 RL + +GV+ N Y ++ G S + +A V+ +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE + R IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 5 RLSVFGTDNIGVYIYTNNKYTIIPRG----LDSETKENIAQVLGTELLEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIYPEFNDIEEKIIKETLGVEDIKRGKIAQMITVGSVGVITNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIKSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_SULIY (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24 Identity = 75/219 (34.25%), Postives = 117/219 (53.42%), Query Frame = 2 Query: 38 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 RL + +GV+ N Y +V G S + + ++ +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_SULIN (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif6 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24 Identity = 75/219 (34.25%), Postives = 117/219 (53.42%), Query Frame = 2 Query: 38 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 RL + +GV+ N Y +V G S + + ++ +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_SULIL (Translation initiation factor 6 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24 Identity = 75/219 (34.25%), Postives = 117/219 (53.42%), Query Frame = 2 Query: 38 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 RL + +GV+ N Y +V G S + + ++ +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218 The following BLAST results are available for this feature:
BLAST of DY257284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257284 ID=DY257284; Name=DY257284; organism=Citrus sinensis; type=EST; length=920bpback to top |