DY257284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METM7 (Translation initiation factor 6 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=eif6 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18 Identity = 70/228 (30.70%), Postives = 109/228 (47.81%), Query Frame = 2 Query: 29 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLV-AGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 700 M + F +GV S T Y + + + L IP + +I + +IG LC GN NGLL+P TT++E++ ++ L + V ++R++ + +A GN I N+ + +L R + I DVL VE A VGS +++G LVHP T +L+ + +L+V V GT NRG + A + N A G DT+ E+ IE L Sbjct: 1 MIMKTYFSGVSTLGVHSLATEDYGFFPLSVDQKTMERMKNVLD--IPATQLNISNSSLIGSLCVGNSNGLLVPDITTEKEVELIKMFLKENSLDVNLERLKAKNTAFGNLILTNNKGCIISEELSR-FRKTIEDVLDVESGVGNYAELPTVGSNGVATDKGCLVHPLTDELELEWIQNILRVDYVERGTANRGVTSVGACILANSKGAVVGGDTSGPEILKIEEALDL 225
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METM5 (Translation initiation factor 6 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=eif6 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.105e-17 Identity = 70/228 (30.70%), Postives = 109/228 (47.81%), Query Frame = 2 Query: 29 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLV-AGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 700 M + F +GV S T Y + + + L IP + +I + +IG LC GN NGLL+P TT++E++ ++ L + V ++R++ + +A GN I N+ + +L R + I DVL VE A VGS +++G LVHP T +L+ + +L+V V GT NRG + A + N A G DT+ E+ IE L Sbjct: 1 MIMKTYFSGVSTLGVHSLATEDYGFFPLSVDQKTMERMKNVLD--IPATQLNISNSSLIGSLCVGNSNGLLVPDITTEKEVELIKMFLKENSLDVNLERLKAKNTAFGNLILTNNKGCIISEELSR-FRKTIEDVLDVESGVGNYAELPTVGSNGVATDKGCLVHPLTDELELEWIQDILRVDYVERGTANRGVTSVGACILANIKGAVVGGDTSGPEILKIEEALDL 225
BLAST of DY257284 vs. ExPASy Swiss-Prot
Match: IF6_METS3 (Translation initiation factor 6 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=eif6 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14 Identity = 57/219 (26.03%), Postives = 101/219 (46.12%), Query Frame = 2 Query: 29 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 685 M R+ ++ +GVF T+ +V + E L + VK+SI G +IG L N NG+++ D+E++ + V I +A+GN +A ND A+ L E ++I D L V V ++ G+ ++GS + +N+G L+ + + ++D + V GTV RG ++ A N A ++T E++ +E Sbjct: 1 MLRRINIVDNPNIGVFILATDDLAVVPYNLLDEKVKLIEETLE--VDAVKSSISGCNLIGSLAVANSNGIVVSPHVLDREVKQFEEL---GLNVATIPGNYTAVGNIVAANDTGAIVSPFLSDEAVKVIEDTLDVNVESTSMVGSDIIGSLITVTNKGFLMDKNATETEVDFARDVFGVEGDIGTVGRGISLVGACSLANSSGAIVAKESTGPEMARVE 214 The following BLAST results are available for this feature:
BLAST of DY257284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257284 ID=DY257284; Name=DY257284; organism=Citrus sinensis; type=EST; length=920bpback to top |