DY257283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11 Identity = 50/177 (28.25%), Postives = 89/177 (50.28%), Query Frame = 3 Query: 237 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKV--NITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTFXXXXXXXXXXXXLNNSLLEGQRIRVNKA 761 V+I N+ IDN L G + +V D++ G S+ + FV +T E AN I+ +NG + +++ V +I++K S + +NF + VY+ NL + ++ E ++ F + G++ SA +SR KS GFGFV + +N+ ++GQ++ V +A Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ----SKFEEMKANFTN----VYIKNLDQEISEEEFRQMFEKFGEITSATLSR-DQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRA 304
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11 Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 3 Query: 237 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLAQV-----DLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTF 677 VYI N ++D+ L +I G +V+ D +GRSR F FV E+A + ++NG E+ GR + V +K + + ++ E N +YV NL + + L+K FS G + S KV G SK GFGFV F Sbjct: 193 VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGV-NLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHSK--GFGFVCF 340
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11 Identity = 50/152 (32.89%), Postives = 72/152 (47.37%), Query Frame = 3 Query: 237 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLAQVD-----LSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTF 677 VYI N ++D+ L +I G +V+ D +GRSR F FV E+A + ++NG E+ GR I V +K + + ++ E N +YV NL + + L+K F G + SAKV G SK GFGFV F Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGV-NLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHSK--GFGFVCF 340
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11 Identity = 41/155 (26.45%), Postives = 75/155 (48.39%), Query Frame = 3 Query: 213 TPSEFARRVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTF 677 T + + + +P+N+ +E + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ A + D+N +YV L KT+T + L++ FS+ G+++++++ T S G GF+ F Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI-------RDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 180
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: ELAV2_RAT (ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11 Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 252 IPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTF 677 +P+N+ +EL + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ A + D+N +YV L KT+T + L++ FS+ G+++++++ T S G GF+ F Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI-------RDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 9.615e-11 Identity = 39/145 (26.90%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 243 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTF 677 + +P+N+ DE + G +E +++ DK TG+S + FV DA+ I LNG ++ + IKV+ A + D+N +YV L KT++ + +++ FS+ G+++++++ T S G GF+ F Sbjct: 43 VNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASI-------RDAN-------LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 173
BLAST of DY257283 vs. ExPASy Swiss-Prot
Match: ELAV1_MOUSE (ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.615e-11 Identity = 42/145 (28.97%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 243 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLAQVDLSLLQAEDSNFVDSTYKVYVGNLAKTVTSEMLKKNFSEKGQVLSAKVSRVPGTSKSSGFGFVTF 677 + +P+N+ +EL + G VE A++I DK G S + FV T +DA I LNG + + IKV+ +P ++V +D+N +Y+ L +T+T + ++ FS G++++++V T S G F+ F Sbjct: 24 VNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA-RPSSEV------IKDAN-------LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRF 154 The following BLAST results are available for this feature:
BLAST of DY257283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257283 ID=DY257283; Name=DY257283; organism=Citrus sinensis; type=EST; length=1072bpback to top |