DY257278

Overview
NameDY257278
Unique NameDY257278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.538e-17
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  301 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            GE  +DC  + TMPNV+F I +  + L+P  YIL       + C SGF   D+PPP GPLWILGDVF+  +++VFD G  ++G A A
Sbjct:  309 GEYAVDCATLDTMPNVTFLINEVSYTLNPTDYILPDLVDGMQFCGSGFQGLDIPPPAGPLWILGDVFIRQFYSVFDRGNNQVGLAPA 395          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  265 INELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMG 507
            +++   ++P   GE +I C+++ ++P V+  +G K + LSPE Y LK  +    VC+SGFM  D+PPP GPLWILGDVF+G
Sbjct:  284 LHKAIGAVPLIQGEYMIPCEKVSSLPQVTLKLGGKDYTLSPEDYTLKVSQAGTTVCLSGFMGMDIPPPGGPLWILGDVFIG 364          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.386e-17
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 1
Query:  301 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFA 555
            G+  +DC  +  MP ++FTI    + ++P+QY L+  +G   VC SGF   D+ PP GPLWILGDVF+G Y++VFD G  R+G A
Sbjct:  304 GDYEVDCTVLNKMPTMTFTINGIGYQMTPQQYTLQDDDG---VCSSGFQGLDISPPAGPLWILGDVFIGQYYSVFDRGNNRVGLA 385          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 48/132 (36.36%), Postives = 65/132 (49.24%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            G    CS    A+V     L    T    ++ I     +  N  GE ++ C  I T+PN+ FTI    + L P  Y+L++ +G    C SGF   D+P   G LWILGDVF+  Y TVFD G  ++G A  A
Sbjct:  261 GQVIACSGSCQAIVDTGTSLLSGPTN--AIASIQGYIGASQNANGEMVVSCSAINTLPNIVFTINGVQYPLPPSAYVLQSQQG----CTSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRGNNQVGLAPVA 386          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  154 ENVSAGDSAV-CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            + +  GD+ + CS    A+V     L     K+  +  + E   + P   GE  +DC  +  MPNV+F I    + LSP  YIL       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  ++G A A
Sbjct:  263 DGIQVGDTVMFCSEGCQAIVDTGTSLITGPPKK--IKQLQEAIGATPMD-GEYAVDCATLNMMPNVTFLINGVSYTLSPTAYILPDLVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRKFYSVFDRGNNQVGLAPA 396          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 1
Query:  301 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            GE  ++C  +  MP+V+FTI    + LSP  Y L       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  R+G A A
Sbjct:  313 GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPA 399          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 42/141 (29.79%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  145 VEKENVSAGDSAVC--SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            +  + VS G S +     CE+ V    + +    +  K+   I +   +    + E ++ C ++PT+P++SF +G + + LS   Y+L+      ++C     A D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  263 ITMKGVSVGSSTLLCEEGCEVVVDTGSSFISAPTSSLKL---IMQALGAKEKRLHEYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 400          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            G++  CS    A+V     L    T    ++ I     +  N  GE +I C  I ++P++ FTI    + LSP  YIL+  +     C SGF   D+P   G LWILGDVF+  Y+TVFD    ++G A  A
Sbjct:  260 GETIACSGGCQAIVDTGTSLLTGPTS--AIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTINGVQYPLSPSAYILQDDDS----CTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 385          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 32/86 (37.21%), Postives = 56/86 (65.12%), Query Frame = 1
Query:  304 ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            E +++C+++PT+P++SF +G + + L+ + Y+L+   G  ++C       D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  317 EYVVNCNQVPTLPDISFHLGGRAYTLTSKDYVLQDPYGNEDLCTLALHGLDVPPPTGPVWVLGASFIRKFYTEFDRHNNRIGFALA 402          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 1
Query:  304 ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            E +++C ++PT+P++SF +G + + LS   Y+L+      ++C     A D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  316 EYVVNCSQVPTLPDISFDLGGRAYTLSSTDYVLQYPNRRDKLCTLALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
The following BLAST results are available for this feature:
BLAST of DY257278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CATE_MOUSE2.538e-1747.13Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATD_SHEEP4.330e-1745.68Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATEB_XENLA7.386e-1747.06Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
PEPA_RHIFE3.666e-1636.36Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
CATE_RAT8.166e-1636.50Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3[more]
CATE_HUMAN3.103e-1544.83Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
RENI2_MOUSE1.179e-1429.79Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
PEPA_PIG1.179e-1435.61Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
RENI_CANFA1.540e-1437.21Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
RENI1_MOUSE2.011e-1438.37Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK1DC10FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257278 ID=DY257278; Name=DY257278; organism=Citrus sinensis; type=EST; length=790bp
GAGTGTAAGCTAGTTGTTTCCCAGTACGGGGATTTAATATGGGATCTTTT
AGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTG
CTTTCAATGGCGCTGAATATGTGAGTACTGGGATCAAGACCGTGGTTGAG
AAGGAAAACGTATCAGCCGGGGATAGTGCAGTGTGCAGTGCTTGTGAAAT
GGCCGTGGTTTGGGTCCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGA
AAGTACTCAGTTATATAAATGAGCTCTGCGACAGCCTGCCAAATCCGATG
GGCGAATCAATTATTGACTGTGATCGCATTCCAACCATGCCAAATGTTTC
ATTCACCATCGGAGACAAAATTTTCAACCTCTCTCCAGAGCAGTATATTC
TGAAAACCGGAGAAGGGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCT
TTCGACCTGCCTCCTCCAAGGGGTCCTCTGTGGATTCTGGGAGATGTATT
CATGGGGGTTTATCACACTGTTTTCGACTCTGGTAAGCTCCGGATCGGCT
TTGCTGAGGCTGCGTAATGATCTACTTACTGTCAAGTTTTTATGTAGTAG
CAGCGATCATCACCTGCTCATATGAGGAGGAGGGTTCTAGAATGTAGATT
ATGGTTTTCATGTACTGTAAAACGATCAGTATGCTTTTATGCATAACTAT
CTTCATCATCACCACAGATGATATGCTGATATATACTTATGTAAAATCCT
ATCATCCTATGTTTAAAGTACTTTAATTTTATGATAATCT
back to top