DY257278

Overview
NameDY257278
Unique NameDY257278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  301 GESII-DCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            GE +  DC  I T+PNV+ T+  + F L+P++Y+L+  E     C+SGFM  +L    G  WILGDVF+  Y+TVFD G  ++GFA A
Sbjct:  295 GEGVFSDCSVINTLPNVTITVAGREFVLTPKEYVLEVTEFGKTECLSGFMGIEL--NMGNFWILGDVFISAYYTVFDFGNKQVGFATA 380          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 43/65 (66.15%), Postives = 46/65 (70.77%), Query Frame = 1
Query:  370 IFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            +F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  205 VFGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 265          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  301 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            GE  ++C+ +  MP+V+F I    + LS   Y L       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  R+G A A
Sbjct:  308 GEYAVECENLNIMPDVTFVINGVPYTLSATAYTLPDFVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRQFYSVFDRGSNRVGLAPA 394          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14
Identity = 50/134 (37.31%), Postives = 69/134 (51.49%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTK--EKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            G++  C+    AVV     L    T    K+ SYI     +  N +GE+II C  I ++P++ FTI +  + L    YILK  +     C+SGF   +L    G LWILGDVF+  Y TVFD    ++G A AA
Sbjct:  262 GETIACADSCQAVVDTGTSLLAGPTSAISKIQSYIG----ASKNLLGENIISCSAIDSLPDIVFTINNVQYPLPASAYILKEDDD----CLSGFDGMNLDTSYGELWILGDVFIRQYFTVFDRANNQVGLAAAA 387          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 1
Query:  310 IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            +++C ++PT+P++SF +G + + LS   Y+ K      ++CI      D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  318 VVNCSQVPTLPDISFYLGGRTYTLSNMDYVQKNPFRNDDLCILALQGLDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 44/132 (33.33%), Postives = 63/132 (47.73%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            G +  CS    A+V     L         ++ I +   +  N  G+ ++ C  I ++P++ FTI    + L    YIL+  +     C SGF   D+P P G LWILGDVF+  Y  VFD G  R+G A  A
Sbjct:  262 GQAIACSGSCQAIVDTGTSLLSGPNN--AIANIQKSIGASQNANGQMVVSCSSIQSLPDIVFTINGIQYPLPASAYILQNQQD----CTSGFQGMDIPTPSGELWILGDVFIRQYFAVFDRGNNRVGLAPVA 387          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            G +  CS    A+V     L    T    ++ I     +  N  G+ +I C  I ++P++ FTI    + L P  YIL++ +G    C+SGF   +LP   G LWILGDVF+  Y  VFD    ++G A  A
Sbjct:  261 GQAIACSDGCQAIVDTGTSLLAGPTN--AIANIQSYIGASQNSYGQMVISCSAINSLPDIVFTINGIQYPLPPSAYILQSQQG----CVSGFQGMNLPTASGELWILGDVFIRQYFAVFDRANNQVGLAPVA 386          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  373 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  207 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 266          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  373 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  222 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 281          
BLAST of DY257278 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  373 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  165 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 224          
The following BLAST results are available for this feature:
BLAST of DY257278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CATD_DICDI2.011e-1445.45Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CARDH_CYNCA3.431e-1466.15Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CATE_RABIT4.481e-1442.53Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
PEPA1_RABIT5.852e-1437.31Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
RENI_RAT7.643e-1438.10Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPA_SUNMU7.643e-1433.33Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA_CANFA7.643e-1434.09Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
CARDG_CYNCA7.643e-1467.19Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDF_CYNCA7.643e-1467.19Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA7.643e-1467.19Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DC10FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257278 ID=DY257278; Name=DY257278; organism=Citrus sinensis; type=EST; length=790bp
GAGTGTAAGCTAGTTGTTTCCCAGTACGGGGATTTAATATGGGATCTTTT
AGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTG
CTTTCAATGGCGCTGAATATGTGAGTACTGGGATCAAGACCGTGGTTGAG
AAGGAAAACGTATCAGCCGGGGATAGTGCAGTGTGCAGTGCTTGTGAAAT
GGCCGTGGTTTGGGTCCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGA
AAGTACTCAGTTATATAAATGAGCTCTGCGACAGCCTGCCAAATCCGATG
GGCGAATCAATTATTGACTGTGATCGCATTCCAACCATGCCAAATGTTTC
ATTCACCATCGGAGACAAAATTTTCAACCTCTCTCCAGAGCAGTATATTC
TGAAAACCGGAGAAGGGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCT
TTCGACCTGCCTCCTCCAAGGGGTCCTCTGTGGATTCTGGGAGATGTATT
CATGGGGGTTTATCACACTGTTTTCGACTCTGGTAAGCTCCGGATCGGCT
TTGCTGAGGCTGCGTAATGATCTACTTACTGTCAAGTTTTTATGTAGTAG
CAGCGATCATCACCTGCTCATATGAGGAGGAGGGTTCTAGAATGTAGATT
ATGGTTTTCATGTACTGTAAAACGATCAGTATGCTTTTATGCATAACTAT
CTTCATCATCACCACAGATGATATGCTGATATATACTTATGTAAAATCCT
ATCATCCTATGTTTAAAGTACTTTAATTTTATGATAATCT
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