DY257271

Overview
NameDY257271
Unique NameDY257271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1221
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.165e-28
Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 2 
Query:  272 KEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            KEHG P D+ RH GDL N+    DG     + D +I L G NSIIGR VV HADPDDLG+GGHEL+ TTGNAG R+ CG+I +
Sbjct:   68 KEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150

HSP 2 Score: 35.8094 bits (81), Expect = 5.165e-28
Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP +K
Sbjct:   50 GDNTNGCMSSGPHFNPYQK 68

HSP 3 Score: 21.9422 bits (45), Expect = 5.165e-28
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GQHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.009e-28
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 2 
Query:  278 HGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            HG P D +RHAGDL N+    DG A  T+VD+QIPLSG NS++GRA V H   DDLG+GGHEL+ TTGNAGGR++CG++ L
Sbjct:  133 HGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 213

HSP 2 Score: 33.113 bits (74), Expect = 6.009e-28
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNP 264
            G+T NGC+STG HFNP
Sbjct:  113 GDTTNGCISTGSHFNP 128
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 8.705e-28
Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 2 
Query:  272 KEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            KEHG P D+ RH GDL N+     G     + D++I L G NSIIGR VV HADPDDLG+GGHEL+ TTGNAG R+ CG+I +
Sbjct:   68 KEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150

HSP 2 Score: 35.039 bits (79), Expect = 8.705e-28
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP  K
Sbjct:   50 GDNTNGCMSSGPHFNPHSK 68

HSP 3 Score: 21.1718 bits (43), Expect = 8.705e-28
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GLHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.166e-27
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 2 
Query:  272 KEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            +EHG PED IRH GDL NV  G DG A +   D  I L+G +SIIGR +V H + DDLG+GGHEL+  TGNAGGR++CG+I L
Sbjct:   68 QEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGL 150

HSP 2 Score: 31.5722 bits (70), Expect = 4.166e-27
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+T NGC S G HFNP ++
Sbjct:   50 GDTTNGCTSAGAHFNPTKQ 68

HSP 3 Score: 22.3274 bits (46), Expect = 4.166e-27
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3 
Query:  183 SGPHGFHVH 209
            +G HGFHVH
Sbjct:   39 AGKHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 9.111e-27
Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 2 
Query:  272 KEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            KEHG P D+ RH GDL N+    D     ++ D++I L G +SIIGR VV HAD DDLG+GGHEL+ TTGNAG R+ CG+I +
Sbjct:   67 KEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKTTGNAGARIGCGVIGI 149

HSP 2 Score: 35.8094 bits (81), Expect = 9.111e-27
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP  K
Sbjct:   49 GDNTNGCMSSGPHFNPRNK 67

HSP 3 Score: 21.1718 bits (43), Expect = 9.111e-27
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   39 GLHGFHVH 46
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 1.535e-26
Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 2 
Query:  272 KEHGPPEDDIRHAGDLKNVN-VGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            ++HG P   +RH GDL N+  + D G    ++ D+QI L GPNSIIGR +V HADPDDLG GGHEL+ TTGNAGGR++CG+I L
Sbjct:   68 QDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151

HSP 2 Score: 29.261 bits (64), Expect = 1.535e-26
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGC S G HFNP ++
Sbjct:   50 GDNTNGCTSAGAHFNPEKQ 68

HSP 3 Score: 21.9422 bits (45), Expect = 1.535e-26
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GKHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROTE (Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.992e-26
Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 2 
Query:  251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            P     GKEHG P D+ RH GDL N+    D     ++ D++I L G +SIIGR VV HAD DDLGQGGHEL+ +TGNAG R+ CG+I +
Sbjct:   61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150

HSP 2 Score: 34.6538 bits (78), Expect = 1.992e-26
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP  K
Sbjct:   50 GDNTNGCMSSGPHFNPYGK 68

HSP 3 Score: 21.1718 bits (43), Expect = 1.992e-26
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GLHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROSI (Superoxide dismutase [Cu-Zn] OS=Drosophila simulans GN=Sod PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.586e-26
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 2 
Query:  251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            P     GKEHG P D+ RH GDL N+    D      + D++I L G +SIIGR VV HAD DDLGQGGHEL+ +TGNAG R+ CG+I +
Sbjct:   61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150

HSP 2 Score: 34.6538 bits (78), Expect = 2.586e-26
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP  K
Sbjct:   50 GDNTNGCMSSGPHFNPYGK 68

HSP 3 Score: 21.1718 bits (43), Expect = 2.586e-26
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GLHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROSE (Superoxide dismutase [Cu-Zn] OS=Drosophila sechellia GN=Sod PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.586e-26
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 2 
Query:  251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            P     GKEHG P D+ RH GDL N+    D      + D++I L G +SIIGR VV HAD DDLGQGGHEL+ +TGNAG R+ CG+I +
Sbjct:   61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150

HSP 2 Score: 34.6538 bits (78), Expect = 2.586e-26
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP  K
Sbjct:   50 GDNTNGCMSSGPHFNPYGK 68

HSP 3 Score: 21.1718 bits (43), Expect = 2.586e-26
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GLHGFHVH 47
[Close]
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_DROME (Superoxide dismutase [Cu-Zn] OS=Drosophila melanogaster GN=Sod PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.586e-26
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 2 
Query:  251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDL 520
            P     GKEHG P D+ RH GDL N+    D      + D++I L G +SIIGR VV HAD DDLGQGGHEL+ +TGNAG R+ CG+I +
Sbjct:   61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150

HSP 2 Score: 34.6538 bits (78), Expect = 2.586e-26
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  217 GNTKNGCMSTGPHFNPARK 273
            G+  NGCMS+GPHFNP  K
Sbjct:   50 GDNTNGCMSSGPHFNPYGK 68

HSP 3 Score: 21.1718 bits (43), Expect = 2.586e-26
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 
Query:  186 GPHGFHVH 209
            G HGFHVH
Sbjct:   40 GLHGFHVH 47
The following BLAST results are available for this feature:
BLAST of DY257271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
SODC_DROVI5.165e-2859.04Superoxide dismutase [Cu-Zn] OS=Drosophila virilis... [more]
SODCP_ZANAE6.009e-2861.73Superoxide dismutase [Cu-Zn], chloroplastic OS=Zan... [more]
SODC_DROWI8.705e-2857.83Superoxide dismutase [Cu-Zn] OS=Drosophila willist... [more]
SODC_SCHMA4.166e-2759.04Superoxide dismutase [Cu-Zn] OS=Schistosoma manson... [more]
SODC_DROPS9.111e-2755.42Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoo... [more]
SODC_BOMMO1.535e-2658.33Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 S... [more]
SODC_DROTE1.992e-2653.33Superoxide dismutase [Cu-Zn] OS=Drosophila teissie... [more]
SODC_DROSI2.586e-2653.33Superoxide dismutase [Cu-Zn] OS=Drosophila simulan... [more]
SODC_DROSE2.586e-2653.33Superoxide dismutase [Cu-Zn] OS=Drosophila sechell... [more]
SODC_DROME2.586e-2653.33Superoxide dismutase [Cu-Zn] OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DB11FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257271 ID=DY257271; Name=DY257271; organism=Citrus sinensis; type=EST; length=1221bp
CAAGGAGGTTACTAGATGATGATGACAAGATGAAATGTTGTGATGCATGT
TTTTTGAGTACTACTAATAAGACAGGAGGTTGTAAATATGGCGTGTTGTA
TGCATCTCCTGTCGTATGCTTTTTCTTTTTCCCTTTTTCCCAGATGTCAA
TATGCTTTGACGTGAAATACTACCTTGTGGACTCTGGACCTCATGGATTC
CATGTTCATGCTCTTAGGAAACACAAAAAATGGTTGCATGTCTACCGGAC
CCCACTTTAACCCTGCTAGGAAAAGAACATGGACCTCCAGAGGATGACAT
TCGTCATGCTGGTGACTTAAAAAATGTCAATGTTGGTGATGATGGTACTG
CTACTTTTACCGTTGTTGACAATCAAATTCCTCTTTCTGGACCAAATTCC
ATTATTGGAAGGGCTGTTGTATTCCACGCAGATCCCGATGATCTTGGCCA
GGGCGGTCATGAGCTAAACTTCACAACTGGAAATGCTGGTGGCAGAGTAT
CTTGCGGCATCATTGACCTCCCTGGGGGAAGCCGCATCTCATCGGACTGT
AATATATTCTTTTGAAATCACGCTTTGTTGCATTATCCTCTTCTCTGCAG
GAGTGACAACCTCCCGACCATGATCTAGAAAAAAAGAAATCAAGAATTTG
CTGGGAAAGCCCAACCCTTTACCAAAATCCCCCTTTTTAATACCCGTCAA
AAAATCCACGCTCTAAGGCGAAAACCCTGAGGGCCCGCCACCCCGCCGGA
GAAGGGACCACTGCATGTTTTTCCTCCTCTTCGATCAACGTCTTTCTGTT
TCTTTGATTTATCAAACTCTCCATCCCCCACAAGTTTTTCCTGCGAGGTG
TGGCCCGACAGAGTACAATGCCCATTCTTGGTAAAAAAANTACTGCCTAA
AGGCTAGCCGCACTCGCAAAAGTAAACCCCATTGTATCCCTCTTTTTTCC
CCTCCCTCTGTATCTTTACTCATCGTCCTATTCTCCTACCTCTCCTACAT
CGTCTCGTCCTCACACCGAATCACTTCCCTAGACCCCACACAACATTCTG
CATTGTCTTTACAGTCACAAACTCATTTTCCCCTCCCTCCTTATATCTTC
CCACATTCTCATCCCCACCCGACCCCCCGCTTTCCAACCCCCTCCCCCAC
CCTCTCCCACCGCCCGTCTATCGTATCTTTCCTATCTCCTACTTGCTCTA
ACATCATATGACGCTCTTACT
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