DY257261

Overview
NameDY257261
Unique NameDY257261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1312
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.814e-15
Identity = 61/173 (35.26%), Postives = 79/173 (45.66%), Query Frame = 2
Query:  140 RPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVD---PDLGFPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFS---------------QAFPPLAT 595
            RP+LGG    PYPRR RTGR R  TD  SEK  G  YVPRDE F  +K   F    + S+ H ++P  ++A          F  F  + +L+  G+ LP   L Q     + LP L +     G+N+L F  P      K  W  DEEF+               Q FPP +T
Sbjct:  227 RPILGGSSIYPYPRRVRTGRERTRTDPNSEK-PGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ----ISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKST 394          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.982e-15
Identity = 59/172 (34.30%), Postives = 79/172 (45.93%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGK-QNPYPRRCRTGRPRCDTDQFSEKR-----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQAFPPLATPV 601
            G PD+  E  R  LGG  + PYPRR RTGRP   TD  SE R       + YVPRDE F  +K   F    + S++  ++P L   F      F  F  +  L+  G+ LP  PL +       L  + + +   G+ IL F TP  +   K  W  DEEF++       PV
Sbjct:  208 GNPDQGKENVRTTLGGSAEYPYPRRGRTGRPPTRTDPKSESRIPLILSLDIYVPRDERFGHLKMSDFLTYALKSIVQFILPELHALFDGTPNEFDSFEDVLRLYEGGIKLPQGPLFKALTAAIPLEMIRELLRTDGEGILRFPTPLVIKDSKTAWRTDEEFAREMLAGVNPV 379          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.506e-15
Identity = 59/172 (34.30%), Postives = 79/172 (45.93%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKR-----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQAFPPLATPV 601
            G PD+  E  R  LGG  + PYPRR RTGRP   TD  SE R       + YVPRDE F  +K   F    + S++  ++P L   F      F  F  +  L+  G+ LP  PL +       L  + + +   G+ IL F TP  +   K  W  DEEF++       PV
Sbjct:  207 GNPDQGKENVRTTLGGSADYPYPRRGRTGRPPTRTDPKSESRIPLILSLDIYVPRDERFGHLKMSDFLTYALKSIVQFILPELHALFDGTPNEFDSFEDVLRLYEGGIKLPQGPLFKALTDAIPLEMIRELLRTDGEGILRFPTPLVIKDSKTAWRTDEEFAREMLAGVNPV 378          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.449e-14
Identity = 57/160 (35.62%), Postives = 80/160 (50.00%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIDDT-GDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PDK  +L RPVLGG    PYPRR RTGR    TD  +EK+   FYVPRDE    +K          S+   + P+ E+AF      + F  F  +  L+  G+ LP        +T++P  ++K +  T G +IL F  P  +   +  W  DEEF++
Sbjct:  193 GNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAR 348          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.893e-14
Identity = 60/163 (36.81%), Postives = 81/163 (49.69%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-----FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIDDT-GDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PD      RP+LGG   +PYPRR RTGR     DQ SEK  G  YVPRDE F  +K   F A  + S+   ++P+ E+ F   DL      F  F  +  L   G+ LP        +T++P  +VK +  T G+ +L F  P  +   K  W  DEEF++
Sbjct:  223 GNPDHGENFARPILGGSSTHPYPRRGRTGRYPTRKDQNSEK-PGEVYVPRDENFGHLKSSDFLAYGIKSLSQYVLPAFESVF---DLNFTPNEFDSFQDVRDLHEGGIKLP----TEVISTIMPLPVVKELFRTDGEQVLKFPPPHVIQVSKSAWMTDEEFAR 377          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.229e-14
Identity = 56/171 (32.75%), Postives = 78/171 (45.61%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG----NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP--RLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQAFPPLATPV 601
            G PDK P+  RPVLGG    PYPRR +TGR    +D  SE R      N YVPRDE FS VK   F A  + SV   LVP + +        F  F  +  L++  + L           ++P     + + + G+  L +  P+ +   +  W  DEEF++       PV
Sbjct:  229 GAPDKGPDSVRPVLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALKSVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVRNDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPV 399          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.217e-14
Identity = 56/152 (36.84%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  140 RPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            RP+LGG  + PYPRR RTGR    TD  SE R       YVPRDE F  +K   F   ++ ++   +VP++ T +VD   G F  F  I  L+  G+ LP  P  +E      L  +   +   GD IL    P+ + +DK  W  DEEF++
Sbjct:  218 RPILGGSPDTPYPRRGRTGRKPTTTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYSIKAIAEGIVPAIRT-YVDTTPGEFDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPMPQIIKQDKEAWRTDEEFAR 368          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 5.508e-14
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  140 RPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            RPVLGG  + PYPRR RTGR    TD  +E R     N YVPRDE F  +K   F   ++ +++  +VP++ T +VD   G F  F  I  L+  G+ LP +          P +LVK  I   GD +L    P  +  DK  W  D+EF++
Sbjct:  215 RPVLGGSPDRPYPRRGRTGRKPTKTDPTAESRLSLLENIYVPRDERFGHLKMADFLGYSIKALVDGIVPAIRT-YVDLTPGEFDSFKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIREDKKAWMTDDEFAR 365          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 3.570e-13
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQ-EGFWNTLLPRLVKAIDDTGDNILL-FETPETMVRDKFFWFKDEEFSQ 574
            G PD+  +  RPVLGG Q +PYPRR RTGR     D  SE R       YVP DE F+ +K   F+  ++ +++  ++P++ T +VD   G F  F  I  L+  G+ LP +   E    +   +L+K +   G + LL F  P+ +  ++  W  DEEF++
Sbjct:  207 GEPDR--DNPRPVLGGSQKHPYPRRGRTGRIPTKKDPNSESRLSLLEQIYVPSDERFAHLKMSDFAGYSIKAIVQGILPAIRT-YVDLTPGEFDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPDIIKENEVAWRTDEEFAR 365          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.357e-12
Identity = 51/156 (32.69%), Postives = 72/156 (46.15%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PDK   L R  LGG  + PYPRR RTGR     D   E    + Y+PRDE F  +K   F    + S+   ++P+ + AF   +  F  F  +  LF  G+ LP         + +P L + +   G+ +L F  P  +   K  W  DEEF +
Sbjct:  219 GNPDKNKNLARTTLGGSSDFPYPRRGRTGRKSTRKDPKCEIPTSDTYIPRDENFGHLKSGDFLTYAIKSLTQNVLPTFQKAF-GFNNEFDTFEDVRGLFEGGLYLPTDVISKI--SPIPVLKEILRTDGEQVLKFPPPHVIRVTKSAWMTDEEFGR 371          
The following BLAST results are available for this feature:
BLAST of DY257261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXX_SOYBN3.814e-1535.26Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV... [more]
LOX1_SOLTU4.982e-1534.30Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOXA_SOLLC6.506e-1534.30Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_SOYBN1.449e-1435.63Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 ... [more]
LOX2_SOYBN1.893e-1436.81Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX5_ARATH3.229e-1432.75Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOX3_ORYSJ4.217e-1436.84Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]
LOX2_ORYSJ5.508e-1437.50Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX1_ORYSJ3.570e-1334.57Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]
LOXA_PHAVU1.357e-1232.69Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DA03FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257261 ID=DY257261; Name=DY257261; organism=Citrus sinensis; type=EST; length=1312bp
CGCTATGTTGTCTTGTCTTCTTGAAGAACACTACTTATCATTGATAATAT
TGTCTTTTGTTTTTATAAGTTGTTTGTTGATCTATTAATGCTTTCCAACA
ATAGTCTCTGGATATCCTGACAAGAAACCTGAATTAACAAGGCCTGTGCT
TGGAGGCAAACAAAACCCTTATCCTAGACGTTGCAGAACTGGACGCCCAC
GGTGTGACACAGATCAATTTTCGGAGAAAAGAGAGGGAAACTTTTATGTT
CCAAGGGATGAAGCATTCTCGGAGGTAAAGCAGCTAACATTTTCAGCAAA
GACGGTGTACTCAGTGTTGCATGCGTTGGTACCATCCTTAGAAACCGCCT
TTGTCGATCCTGATCTGGGGTTTCCATACTTCTCTGCTATTGACGCACTC
TTCAATGAAGGAGTCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGAA
CACACTGCTTCCCAGATTGGTTAAGGCAATTGATGATACAGGAGATAATA
TTTTGCTGTTTGAAACGCCAGAAACGATGGTCAGAGACAAATTCTTTTGG
TTTAAGGATGAAGAATTTTCACAGGCATTCCCTCCACTAGCTACACCTGT
TTTCCCCACCGTTAATCACAGTCCTGGCAATTGAGAAACCCTCTCTGATC
CGGAAATTTTCCGATCAACCAAAATAAAAAATAATATCTTATTCTTTTCA
ATAATAAATGCGGGGGAGGGACTTCCTGTAATTGAGGAAACGAACGAACA
CATAAAACACGGTTTGTATTTGTAGAGGCTTCGCCCATGTAAATATGATC
CCATACCTACATTTAAATTAAACTATGACCTACATAAGTGTATATCAATG
ATGAATTGAATCTTTTGTTGGTTAGTACTTATTCTTTTTTCACTTCACAG
AATATTTTTACATATATTGTTAGGGCAGTTTTTACGGTGGTGTTAGTAAA
ATAGAAACGCTCCTCTGCTCGAATTTCAGCAAACACGGCACGTGGATGAC
CAAAAAGAATACTTAACTCTCGCCTAATACTCCCGATCAGCCTCTCTCTA
GAGTCTCGCCGACACTCCCCTCTAACTCCCACCTACACAGTATAGATGAG
TTAATAGTACCCCTTTTGGACTAATACTTACAATCCACTCACTATCCCCC
CTCAACAATAATACTCCCATTAACTCAACTATAATTCATTCATACTACCT
GCTAGAAGCAACAGTCCTCTTTCCCTCCAATTAAACAAAAATAACAGCCA
ATACACAATAAACCAACAAAGCGACACCTTCAACACCACTTTCTCCTCCA
TCATCAAGCTAA
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