FC871264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.331e-11 Identity = 45/171 (26.32%), Postives = 81/171 (47.37%), Query Frame = 2 Query: 44 NPC--TWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKEL---------------GNLKSLVSM-------DMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 484 +PC +W +TC ++ V + + +SG+LG ++G L+ L YL++ N+++G +P +L GN+ VS+ ++ N L GE+ F L L+ + L++N+LTG +P+ L+ LK + N G+I + NN+ G Sbjct: 57 DPCGDSWDGITCKGSS-VTEIKVSGRGLSGSLGYQLGNLKSLTYLDVSKNNLNGNLPYQLPDKLTYLDGSENDFNGNVPYSVSLMNDLSYLNLGRNNLNGELSDMFQKLPKLETIDLSSNQLTGKLPQSFANLTGLKTLHLQENQFKGSINALRDLPQIDDVNVANNQFTG 226
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 101 DLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP---------VDGPFRSFPMESFENNKLNG 484 D+ N N S + ++ L L L N+++G IP +G SL +D+ NKL G IP S NL+ L L L NN L GS+P + L DVS N L G++P ++ +F +E +N L+G Sbjct: 275 DISNGNSSLEF---IKDMKSLSILVLRNNNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQKG--QSLSNVDVSYNDLSGSLPSWVSLPNLNLNLVANNFTLEGLDNRVLSG 406
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 98 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV--DGPFRSFPMESFENNKLNGP 487 +D N++I G++ + LQ L L N+ +G IP+ L +LKSL M + +N L G+IP F +L + + L++N L+G +P + LS L + NN L G + V D P + + ENN NGP Sbjct: 105 MDFSNNHIGGSIPSTLPV--SLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGELDVLQDLPLKDL---NVENNLFNGP 231
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 101 DLGNSNISGT-LGPEV--GQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424 +L N+ G LGPEV +L + L N KIP+++ L L S+D+ NK G IP+ +L SL+ L L N L+GS+P S L++ DVS N L G +P Sbjct: 180 NLQELNLGGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLP 290
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 161 LQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424 LQ L L N G IP ELGNL +L +D++ N L G IP SF L+ L L+ N+LTGSIP L L V D++ N L G +P Sbjct: 161 LQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPG--FVLPALSVLDLNQNLLTGPVP 246 HSP 2 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 2 Query: 68 TCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKEL------------GN--------------LKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 430 T S +I++DL + ++G + + +L L L+L N +SG P L GN LK+L+ + + + ++G IPKS L SL+ L L N LTG IP E + L +++N L G +P + Sbjct: 248 TLTSCGSLIKIDLSRNRVTGPIPESINRLNQLVLLDLSYNRLSGPFPSSLQGLNSLQALMLKGNTKFSTTIPENAFKGLKNLMILVLSNTNIQGSIPKSLTRLNSLRVLHLEGNNLTGEIPLEFRDVKHLSELRLNDNSLTGPVPFE 394
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 2 Query: 62 HVTCD-------SNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDI-----------------------SGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424 ++TCD S+ HVIR+ L + N++G + PE +L+HL+ L+L N + SG PK L L L ++ + N+ G IP L L+ L L +N TG + +L L +L +S+N G IP Sbjct: 76 NITCDCSFLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMRLEDLSFMGNRLSGPFPKVLTRLTMLRNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTGPLTEKLGLLKNLTDMRISDNNFTGPIP 226 The following BLAST results are available for this feature:
BLAST of FC871264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871264 ID=FC871264; Name=FC871264; organism=Citrus sinensis; type=EST; length=654bpback to top |