FC871264

Overview
NameFC871264
Unique NameFC871264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.071e-13
Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 2
Query:   98 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424
            +DL  + ++GT+   + Q+  L+ L +  N +SG  P +LG++ +L  +++  N   G +P++  NL+SLK L L+ N  TG IP  L+ L +L  F +  N L G IP
Sbjct:  119 IDLSRNFLNGTIPTTLSQIP-LEILSVIGNRLSGPFPPQLGDITTLTDVNLETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIP 226          

HSP 2 Score: 68.5514 bits (166), Expect = 3.331e-11
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  104 LGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424
            +GN  +SG   P++G +  L  + L  N  +G +P+ LGNL+SL  + +  N   G+IP+S +NLK+L   R++ N L+G IP  +   + L+  D+    + G IP
Sbjct:  145 IGN-RLSGPFPPQLGDITTLTDVNLETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIPDFIGNWTLLERLDLQGTSMEGPIP 250          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.071e-13
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 2
Query:   44 NPCTWFHVTCDSNNHVIRLDLGNSNISGTLG-PEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP-VDGPFRSFPMESFENNKLNG 484
            +PC W  V CD+   V  L L  S + G+L    +G L  L+ L L  N +SG IP +  NL  L  + +  N   GEIP     L S+  + L  NK +G IP  + + + L    +  N L G IP +  P + F + S   N+LNG
Sbjct:   53 SPCNWHGVHCDAGR-VTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIPEITLPLQQFNVSS---NQLNG 197          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12
Identity = 46/150 (30.67%), Postives = 70/150 (46.67%), Query Frame = 2
Query:   62 HVTCD------SNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPK-----------------------ELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424
            ++TCD      S   V  + L   N+ G + PE G L  L  ++L +N +SG IP                        +LG + +L  + M  N   G++P +  NL+SLK L +++N +TG IP  L+ L +L  F +  N L G IP
Sbjct:   75 NITCDCTFNASSVCRVTNIQLRGFNLRGIIPPEFGNLTRLTEIDLVLNFLSGTIPTTLSQIPLEILAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIP 224          

HSP 2 Score: 70.4774 bits (171), Expect = 8.767e-12
Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 2
Query:   95 RLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLR------------------------LNNNKLTGSIPREL-TTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESF---ENNKLNGP 487
            RL + ++NI+G +   +  L++L    +  N +SGKIP  +GN   LV +D+    +EG IP S +NLK+L  LR                        L N  +   IP  + T+++ LK+ D+S+N L GTIP    FRS    +F    NN L GP
Sbjct:  187 RLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIP--DTFRSLNAFNFMYLNNNSLTGP 343          

HSP 3 Score: 67.3958 bits (163), Expect = 7.422e-11
Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 2
Query:   98 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424
            L +  + +SG   P++GQ+  L  + +  N  +G++P  LGNL+SL  + +  N + G IP+S +NLK+L   R++ N L+G IP  +   + L   D+    + G IP
Sbjct:  140 LAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIP 248          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12
Identity = 56/173 (32.37%), Postives = 82/173 (47.40%), Query Frame = 2
Query:   50 CTWFHVTCDSNN-HVIRLDLGNSNISGTLGPE-VGQLQHLQYLELY-----------------------MNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFP---MESFENNKLNG 484
            C+W  + CDS N HVI L     ++SG +    +G+L  LQ L+L                         N ISG     +GN   L  +D+ +N   G IP++  +L SL+ L+L++N    SIPR L     L   D+S+N L G++P DG   +FP     S   NK++G
Sbjct:   55 CSWQGLFCDSKNEHVIMLIASGMSLSGQIPDNTIGKLSKLQSLDLSNNKISALPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLP-DGFGSAFPKLETLSLAGNKIHG 226          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12
Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 2
Query:   95 RLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 430
            +LDL  ++ +G L      L++L  L++  N ++G IP  LG L  L+ ++   N     IP    +L +L    L+ N L+GS+P+EL  LS L++  + +N L GT+PVD
Sbjct:  180 QLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVD 291          

HSP 2 Score: 72.0182 bits (175), Expect = 3.013e-12
Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 2
Query:   98 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424
            LDL + +++G +   +G L  L+ L L  N ++  +P  LG L +L  +D+  N   G +P+SF++LK+L  L +++N LTG IP  L  LS L   + S+N     IP
Sbjct:  133 LDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIP 241          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.353e-12
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 2
Query:   98 LDLGNSNISGTLGPEVGQLQHLQYLELYMND-ISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPREL-TTLSDLKVFDVSNNGLCGTIP 424
            L+LG++ ++G + P +G+L  L  L+L  N  +  +IP  LG L  L  + ++ +   GEIP SF  L SL+ L L+ N L+G IPR L  +L +L   DVS N L G+ P
Sbjct:  176 LNLGSNLLTGIVPPAIGKLSELVVLDLSENSYLVSEIPSFLGKLDKLEQLLLHRSGFHGEIPTSFVGLTSLRTLDLSLNNLSGEIPRSLGPSLKNLVSLDVSQNKLSGSFP 286          

HSP 2 Score: 71.633 bits (174), Expect = 3.935e-12
Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 2
Query:   95 RLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 424
            +     +  SG L P       L  + +  N + GKIP EL N K LVS+ +  N   GEIP S A+L  L +L L++N LTG IP+ L  L  L +F+VS NGL G +P
Sbjct:  393 KFSASQNRFSGELPPNFCDSPVLSIVNISHNRLLGKIP-ELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQNLK-LALFNVSFNGLSGEVP 500          

HSP 3 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = 2
Query:   95 RLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELG-NLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV 427
            +L L  S   G +      L  L+ L+L +N++SG+IP+ LG +LK+LVS+D+  NKL G  P    + K L  L L++N   GS+P  +     L+   V NNG  G  PV
Sbjct:  224 QLLLHRSGFHGEIPTSFVGLTSLRTLDLSLNNLSGEIPRSLGPSLKNLVSLDVSQNKLSGSFPSGICSGKRLINLSLHSNFFEGSLPNSIGECLSLERLQVQNNGFSGEFPV 335          

HSP 4 Score: 67.3958 bits (163), Expect = 7.422e-11
Identity = 38/137 (27.74%), Postives = 66/137 (48.18%), Query Frame = 2
Query:   77 SNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNG 484
            S  +++ LD+  + +SG+    +   + L  L L+ N   G +P  +G   SL  + + +N   GE P     L  +K +R +NN+ TG +P  ++  S L+  ++ NN   G IP   G  +S    S   N+ +G
Sbjct:  267 SLKNLVSLDVSQNKLSGSFPSGICSGKRLINLSLHSNFFEGSLPNSIGECLSLERLQVQNNGFSGEFPVVLWKLPRIKIIRADNNRFTGQVPESVSLASALEQVEIVNNSFSGEIPHGLGLVKSLYKFSASQNRFSG 403          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.353e-12
Identity = 49/179 (27.37%), Postives = 88/179 (49.16%), Query Frame = 2
Query:   23 SFDPTLVNPCTWFHVTCDSNNHVI-RLDLGNSNISGTLGPEV-GQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLS----------------------DLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGP 487
            ++ P+L     W  VTC+S++  +  L L  + + G +   +  +L +L++L L  N+ISG  P  L  LK+L  + +  N+  G +P   ++ + L+ L L+NN+  GSIP  +  L+                       LK+ ++++N L GT+P     + FP+ +F  NK+  P
Sbjct:   44 NWSPSLSICTKWTGVTCNSDHSSVDALHLAATGLRGDIELSIIARLSNLRFLILSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPDLHIPGLKLLNLAHNNLTGTVPQS--LQRFPLSAFVGNKVLAP 220          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   44 NPC--TWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLE----------------------LYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFE--NNKLNG 484
            +PC  +W  +TC+ +  V+ +D+ +  +SGTLG  +  L+ L+ L+                      L  N++SG +P  +  + SL  M++  N L   I   FA+ KSL  L L++N  +G +P  L+T+S L V  V NN L G+I V       P+++    NN  NG
Sbjct:   59 DPCGESWKGITCEGSA-VVTIDISDLGVSGTLGYLLSDLKSLRKLDVSGNSIHDTLPYQLPPNLTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNFSGDLPSSLSTVSTLSVLYVQNNQLTGSIDV---LSGLPLKTLNVANNHFNG 227          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.013e-12
Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 2
Query:   50 CTWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 430
            C+WF VTC  +N V  L+L   ++ GTL PE+ QL  L+ L L  N +SG IP E  +   L  +D+  N L G +P     + + + L L+ NK  G +  +   L  L    ++ N    ++  D
Sbjct:   64 CSWFGVTC-VDNKVQMLNLSGCSLGGTLAPELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLLLSGNKFAGFMTVKFLRLQSLYKVQMNKNRELSSVSAD 189          
BLAST of FC871264 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.935e-12
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2
Query:   98 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYHNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPME--SFENNKLNGP 487
            +D  N+ I G++   +     LQ+  L  N  +G IP+ LG L  L  M +  N L GE+P  F NL  L  L +++N ++G++P  +  L  L    V NN L GT+ V    +  P++  + ENN  +GP
Sbjct:  103 IDFSNNRIGGSIPSTLPVT--LQHFFLSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPSMENLLTLTTLRVQNNQLSGTLDV---LQGLPLQDLNIENNLFSGP 229          
The following BLAST results are available for this feature:
BLAST of FC871264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
Y5343_ARATH6.071e-1334.86Probable LRR receptor-like serine/threonine-protei... [more]
Y3288_ARATH6.071e-1334.23Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y5344_ARATH1.036e-1230.67Probable LRR receptor-like serine/threonine-protei... [more]
Y2242_ARATH1.036e-1232.37Probable LRR receptor-like serine/threonine-protei... [more]
Y2165_ARATH1.036e-1234.82Probable LRR receptor-like serine/threonine-protei... [more]
Y5694_ARATH1.353e-1239.64Probably inactive leucine-rich repeat receptor-lik... [more]
Y5332_ARATH1.353e-1227.37Probable inactive receptor kinase At5g53320 OS=Ara... [more]
SRF8_ARATH1.766e-1230.64Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y5458_ARATH3.013e-1232.28Probable LRR receptor-like serine/threonine-protei... [more]
SRF3_ARATH3.935e-1233.33Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DH01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871264 ID=FC871264; Name=FC871264; organism=Citrus sinensis; type=EST; length=654bp
GGACCCCACAAAAGAGNAGCAGAGCTTCGACCCAACACTGGTTAATCCCT
GCACTTGGTTCCATGTCACCTGTGATTCCAACAATCATGTGATTCGTTTG
GACTTGGGTAACTCTAATATTTCTGGAACTTTGGGGCCTGAGGTTGGCCA
GCTCCAGCATCTGCAGTACTTGGAGCTTTACATGAATGACATAAGTGGGA
AAATTCCGAAAGAGTTAGGTAATTTGAAAAGCCTTGTCAGCATGGATATG
TATCATAATAAACTGGAAGGAGAAATACCAAAGTCCTTTGCCAATTTGAA
GTCACTTAAATTTCTGCGGTTGAACAACAACAAACTAACAGGATCAATTC
CGAGGGAGCTGACCACCCTGTCGGACCTCAAAGTTTTTGATGTTTCTAAC
AATGGTCTCTGTGGGACAATCCCTGTTGATGGTCCTTTTAGAAGCTTTCC
TATGGAGAGTTTTGAAAATAATAAACTCAATGGACCAGAGCTGCAAGGAC
TGGTGCCTTATGATTTTGGATGCTGAAGAAGGTTGAAAACCCTCCGTCTT
CTATTGAAGACCATAATGTTAAAGACTCGTATAGGGTAAAATTATATTGT
GTGCCTCAGCTTGATCGAATGGCTAGATATATTATGTCAGCGGCGGTGAC
TGTT
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